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Tan0014886 (gene) of Snake gourd v1 genome

Gene IDTan0014886
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNase H domain-containing protein
Genome locationLG07:30533227..30537378
RNA-Seq ExpressionTan0014886
SyntenyTan0014886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045848.1 hypothetical protein E6C27_scaffold243G003810 [Cucumis melo var. makuwa]5.1e-1464.41Show/hide
Query:  LVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPSTANLKSS
        LV C+ C+K +WKGCG HLP LYK VEKGKHC CRPWPGVVVP ED       +N++SS
Subjt:  LVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPSTANLKSS

KAG6605256.1 hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2474.65Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPG-VVVPSEDAAD----TPSTANLKSSIPPG
        MCYLV+C+TCNKTSWKGCG+HLPDLY R+EKGKHCTCRPWPG VVVP +D+AD     PS AN KSS+P G
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPG-VVVPSEDAAD----TPSTANLKSSIPPG

KAG7035219.1 hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2474.65Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPG-VVVPSEDAAD----TPSTANLKSSIPPG
        MCYLV+C+TCNKTSWKGCG+HLPDLY R+EKGKHCTCRPWPG VVVP +D+AD     PS AN KSS+P G
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPG-VVVPSEDAAD----TPSTANLKSSIPPG

KGN62035.1 hypothetical protein Csa_006238 [Cucumis sativus]1.1e-1663.24Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADT--PSTANLKSSIPPG
        MC LV C+ C+K +WKGCG HLP LYK VEKGKHC C PWPGVVVP ED  DT  PS     SS+  G
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADT--PSTANLKSSIPPG

POO02641.1 hypothetical protein TorRG33x02_016270 [Trema orientale]6.7e-1458.18Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPS
        MCY V+C+TC K +W GCG HLP LY  +EKGKHC CR WPGVV+P++ +    S
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPS

TrEMBL top hitse value%identityAlignment
A0A0A0LJK5 Uncharacterized protein5.3e-1763.24Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADT--PSTANLKSSIPPG
        MC LV C+ C+K +WKGCG HLP LYK VEKGKHC C PWPGVVVP ED  DT  PS     SS+  G
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADT--PSTANLKSSIPPG

A0A200R7D4 Uncharacterized protein9.4e-1459.26Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTP
        MC+ V+C+ C K SW GCGDH+  LY  +EKGKHC CR WPGVVVP+E     P
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTP

A0A2P5FXW5 Uncharacterized protein3.2e-1458.18Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPS
        MCY V+C+TC K +W GCG HLP LY  +EKGKHC CR WPGVV+P++ +    S
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPS

A0A3N7EY41 Uncharacterized protein5.5e-1459.65Show/hide
Query:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAA--DTPS
        MCY V+C+ C K SW+GCG+HL  LY  ++KGKHC C+ WPGVVVP+E+ A   TPS
Subjt:  MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAA--DTPS

A0A5A7TSL2 Uncharacterized protein2.5e-1464.41Show/hide
Query:  LVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPSTANLKSS
        LV C+ C+K +WKGCG HLP LYK VEKGKHC CRPWPGVVVP ED       +N++SS
Subjt:  LVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPSTANLKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTATCTTGTCCAGTGCGAGACGTGCAATAAGACCTCCTGGAAGGGCTGCGGCGATCACCTTCCTGATCTCTACAAGCGAGTAGAAAAGGGAAAGCACTGCACTTG
CCGACCTTGGCCCGGCGTCGTCGTGCCATCGGAGGATGCTGCTGACACGCCATCGACCGCAAACCTCAAATCATCCATCCCTCCAGGCACTGAGAGTTGGGGTTCGTTTG
TGCAGGTAAGACATATGTTAAGGAAGGTTAGGGAGATGTGGAGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTATCTTGTCCAGTGCGAGACGTGCAATAAGACCTCCTGGAAGGGCTGCGGCGATCACCTTCCTGATCTCTACAAGCGAGTAGAAAAGGGAAAGCACTGCACTTG
CCGACCTTGGCCCGGCGTCGTCGTGCCATCGGAGGATGCTGCTGACACGCCATCGACCGCAAACCTCAAATCATCCATCCCTCCAGGCACTGAGAGTTGGGGTTCGTTTG
TGCAGGTAAGACATATGTTAAGGAAGGTTAGGGAGATGTGGAGTAGCTAAATTTAAAAGTTAGAATAATTAGTATTGTAATGGTGAAGGGTGGTTGAGTCATTTAAGCAA
ATTTCATATGGATTATTGTCACATAAATAATGAAGGGTTTGTAAAGGATGCCATCGCATCCCATTATTCTTATTATATTTTGGGTCATTTTTCTCGTTTGAAGTTTATGG
TCACATCTCATTTTCCTTGTTCGGGTCGTTTATGTAATTTTATTTGTAATGTCTTTATGTTAAAAATTGTAGATGTTTAGTCAACTCATGTTGACCTATGATTCAAAGAA
AAAATAAAAAGAAAAA
Protein sequenceShow/hide protein sequence
MCYLVQCETCNKTSWKGCGDHLPDLYKRVEKGKHCTCRPWPGVVVPSEDAADTPSTANLKSSIPPGTESWGSFVQVRHMLRKVREMWSS