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Tan0014899 (gene) of Snake gourd v1 genome

Gene IDTan0014899
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:72168631..72171771
RNA-Seq ExpressionTan0014899
SyntenyTan0014899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RAL44980.1 hypothetical protein DM860_003739 [Cuscuta australis]1.3e-0737.84Show/hide
Query:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL
        G+ SL   V+T SVG L++ AWGL S  +K  Y     AMS     +  L+ +     E    + F+ L      + F R+A+Y+CAA LR+ITKD  +L
Subjt:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL

Query:  LRRWGYIDRQY
         R W  I R Y
Subjt:  LRRWGYIDRQY
VFQ96336.1 unnamed protein product [Cuscuta campestris]1.3e-0737.84Show/hide
Query:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL
        G+ SL   V+T SVG L++ AWGL S  +K  Y     AMS     +  L+ +     E    + F+ L      + F R+A+Y+CAA LR+ITKD  +L
Subjt:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL

Query:  LRRWGYIDRQY
         R W  I R Y
Subjt:  LRRWGYIDRQY
TrEMBL top hitse value%identityAlignment
A0A328DIF3 Uncharacterized protein6.2e-0837.84Show/hide
Query:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL
        G+ SL   V+T SVG L++ AWGL S  +K  Y     AMS     +  L+ +     E    + F+ L      + F R+A+Y+CAA LR+ITKD  +L
Subjt:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL

Query:  LRRWGYIDRQY
         R W  I R Y
Subjt:  LRRWGYIDRQY
A0A484N758 Uncharacterized protein6.2e-0837.84Show/hide
Query:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL
        G+ SL   V+T SVG L++ AWGL S  +K  Y     AMS     +  L+ +     E    + F+ L      + F R+A+Y+CAA LR+ITKD  +L
Subjt:  GLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL-EGVDVDQFRRSASYLCAAALRMITKDHENL

Query:  LRRWGYIDRQY
         R W  I R Y
Subjt:  LRRWGYIDRQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAGTAAAAGAGTTGTTTGAAGCTTTTTCTTCAAGGGCAGATCTTGGAGAAAAAGAGCATAAAACTGTGCATAGGAAAAGGCAAGAGGAACTTGCAATCAAGAT
CCTCGAAGAACTTGGATTATCATCTCTTACATCAAATGTCAGCACATTCTCTGTTGGTGCCCTAATTTTGGGAGCATGGGGCTTGTTCTCCGGTCACCACAAAGGTAACT
ATGCCCTAACTTATCCTGCAATGTCTGTTACTCCAAAATCTATAGACACTCTAGATACAAAAGTTTTTAGGGCTGCTGAAAATCCTGCACCTGTATCTTTCAGTAATCTG
GAAGGTGTTGATGTTGATCAGTTTAGACGCAGTGCTAGCTATCTCTGTGCTGCTGCACTGCGCATGATCACTAAGGATCATGAAAATCTTTTAAGGCGTTGGGGATATAT
TGATCGTCAGTACAAAAAAGTTTTACAAGGAAGAGATTGCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAGTAAAAGAGTTGTTTGAAGCTTTTTCTTCAAGGGCAGATCTTGGAGAAAAAGAGCATAAAACTGTGCATAGGAAAAGGCAAGAGGAACTTGCAATCAAGAT
CCTCGAAGAACTTGGATTATCATCTCTTACATCAAATGTCAGCACATTCTCTGTTGGTGCCCTAATTTTGGGAGCATGGGGCTTGTTCTCCGGTCACCACAAAGGTAACT
ATGCCCTAACTTATCCTGCAATGTCTGTTACTCCAAAATCTATAGACACTCTAGATACAAAAGTTTTTAGGGCTGCTGAAAATCCTGCACCTGTATCTTTCAGTAATCTG
GAAGGTGTTGATGTTGATCAGTTTAGACGCAGTGCTAGCTATCTCTGTGCTGCTGCACTGCGCATGATCACTAAGGATCATGAAAATCTTTTAAGGCGTTGGGGATATAT
TGATCGTCAGTACAAAAAAGTTTTACAAGGAAGAGATTGCGATTAGTTTTGAATCTTGATAGAAAATGTGTGAGTTTAGTAGGAGAGCTGCTGAAGGAAAGGATCATATA
GGTGTTTTTTTACTGGCACATCAGGATCTTGGTGGACTGGATAAAGAACTTTGTAAAGATGTTGTATGAGATGTATATGTCTTGCAATGGGATGCATGGTTATACCCTTT
TGAAAGACTGTGCTGCCATGTTGAACACACCAATCCACAATTTGATTAATGCATTGCTTGATTTTCCTAATACAAGAGATGGACTCCAATGTGCAATTCATGTGTTGGAG
ACTTATGAGATGCCTAAAACAGAGGAGGCTAACAAGAAGCTTTCTGCTGCAACTAACTACATGGAGATATGCTAGGATATTTGATGAAG
Protein sequenceShow/hide protein sequence
MVAVKELFEAFSSRADLGEKEHKTVHRKRQEELAIKILEELGLSSLTSNVSTFSVGALILGAWGLFSGHHKGNYALTYPAMSVTPKSIDTLDTKVFRAAENPAPVSFSNL
EGVDVDQFRRSASYLCAAALRMITKDHENLLRRWGYIDRQYKKVLQGRDCD