; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014915 (gene) of Snake gourd v1 genome

Gene IDTan0014915
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationLG10:35437702..35438346
RNA-Seq ExpressionTan0014915
SyntenyTan0014915
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.2e-5458.33Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +V SN+Y GPITRSRSKG+    D+  + +A +I+K+L E+ K  +++K+NPL+D S  + ++ ++ + PDVMSVMMAD+ P+  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKIN LMKAVEERD EI  L+ Q++ +ETAESSQTP V+  DKGKN++QE QP Q + SVASLSVQQLQ MI +SIRAQYGGP Q    YSK YTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV--TPLLFYDYN
        LRMP+   P  F  +N
Subjt:  LRMPV--TPLLFYDYN

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.6e-5360.98Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +  S++Y GPITRSRSKG+    D+   A+A +I+K+L E+ K  +++K+NPL++    A ++  + + PDVMSVMMADV  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKINLLMK V+ERD EIA LK Q+Q +ETAESSQTP V+ +DKGKN++QE QP Q + SVASLSVQQLQ MI SSIRAQYGGP+Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.6e-5360.98Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +  S++Y GPITRSRSKG+    D+   A+A +I+K+L E+ K  +++K+NPL++    A ++  + + PDVMSVMMADV  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKINLLMK V+ERD EIA LK Q+Q +ETAESSQTP V+ +DKGKN++QE QP Q + SVASLSVQQLQ MI SSIRAQYGGP+Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.6e-5360.98Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +  S++Y GPITRSRSKG+    D+   A+A +I+K+L E+ K  +++K+NPL++    A ++  + + PDVMSVMMADV  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKINLLMK V+ERD EIA LK Q+Q +ETAESSQTP V+ +DKGKN++QE QP Q + SVASLSVQQLQ MI SSIRAQYGGP+Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

XP_031744658.1 uncharacterized protein LOC116405107 [Cucumis sativus]1.6e-5360.98Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +  S++Y GPITRSRSKG+    D+   A+A +I+K+L E+ K  +++K+NPL++    A ++  + + PDVMSVMMADV  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKINLLMK V+ERD EIA LK Q+Q +ETAESSQTP V+ +DKGKN++QE QP Q + SVASLSVQQLQ MI SSIRAQYGGP+Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein5.5e-5258.05Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +V S++Y GPITRSRSKG+    D+  + +A  I+K+L E+ K  +++K+N L+D S  A N+ ++ + PDV SVMMAD+  +  M EME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKIN LMKAVEERD EI   + Q++ +ETAESSQTP V+  DKGKN++QE QP Q + SVASLSVQQLQ MI +SI+AQYGGP Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

A0A5A7UF60 Ty3-gypsy retrotransposon protein6.1e-5158.05Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKKVAS   V S++Y GPITRSRSKG+    D+  + + S I+K+L E+ K  +++K NPL+D S  A +  ++ + PDVMSVMMAD+  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        +KIN LMKAVEERD EI  L+ Q++ +ETAESSQTP V+  DKGKN++QE QP Q + SVASLS+QQLQ MI +SIRAQYGG  Q    Y KPYTKRID+
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

A0A5A7VCU1 Ty3-gypsy retrotransposon protein3.3e-4956.59Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +V S+ Y GPITR+RSKG+    D+  D +  +I+K+L E+ K  +++K+N L+D S  A ++ ++   PDVMSVMM D+  +  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKIN LMK VEERD EI  L+ Q+Q +ET ESSQT  V+  DKGKN++QE QP Q + SVASLSVQQLQ MI +S RAQYGGP Q    YSK YTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.5e-5458.33Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +V SN+Y GPITRSRSKG+    D+  + +A +I+K+L E+ K  +++K+NPL+D S  + ++ ++ + PDVMSVMMAD+ P+  MAEME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        RKIN LMKAVEERD EI  L+ Q++ +ETAESSQTP V+  DKGKN++QE QP Q + SVASLSVQQLQ MI +SIRAQYGGP Q    YSK YTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV--TPLLFYDYN
        LRMP+   P  F  +N
Subjt:  LRMPV--TPLLFYDYN

A0A5D3CD35 Ty3-gypsy retrotransposon protein3.7e-4854.63Show/hide
Query:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME
        M SKK AS  +V S++Y GPIT S SKG+    D+  + +A +I+K+L E+ K  +++K+NPL+D    A ++ ++ + PDVM VMMAD+  +  MA+ME
Subjt:  MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEME

Query:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN
        +KIN LMKA+EE D EI  L+ Q++ +ETAESSQTP V+  DKGKN++Q+ QP Q + S+ASLSVQ+LQ MI +SIRAQYGGP Q    YSKPYTKRIDN
Subjt:  RKINLLMKAVEERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLA-SVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDN

Query:  LRMPV
        LRMP+
Subjt:  LRMPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAAAGAAAGTTGCGTCAACTGTTGCTGTTGTAAGTAACTCCTACATGGGACCAATAACTCGCAGTCGTTCCAAAGGGGTTGAAACAAGTAATGATCGGACTCC
TGATGCAATGGCAAGCAACATCATCAAACGGCTAGATGAGGCTTCAAAAGGCAAGGTTATCGTCAAAGATAACCCGTTGTTTGATCAATCAACTCCTGCTCTTAATCAAC
AAAGGGAAACATCAACTCCTGATGTAATGTCAGTCATGATGGCTGATGTAGACCCTGATGAAAGAATGGCAGAGATGGAAAGAAAGATCAATCTCCTAATGAAGGCGGTA
GAAGAGAGGGATCTTGAAATTGCCTATCTCAAGAATCAGGTCCAAAACAAAGAAACGGCTGAATCTAGCCAAACTCCTGCAGTAAGAAACAATGACAAGGGGAAAAATAT
CATCCAAGAGGAGCAACCGCCTCAACTAGCTTCAGTTGCTTCTTTATCCGTCCAACAACTACAGTACATGATCATGAGTTCTATCAGAGCTCAATATGGCGGACCCGCTC
AAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGGATTGACAATTTGAGGATGCCTGTAACGCCCCTACTTTTCTATGACTATAACTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAAAGAAAGTTGCGTCAACTGTTGCTGTTGTAAGTAACTCCTACATGGGACCAATAACTCGCAGTCGTTCCAAAGGGGTTGAAACAAGTAATGATCGGACTCC
TGATGCAATGGCAAGCAACATCATCAAACGGCTAGATGAGGCTTCAAAAGGCAAGGTTATCGTCAAAGATAACCCGTTGTTTGATCAATCAACTCCTGCTCTTAATCAAC
AAAGGGAAACATCAACTCCTGATGTAATGTCAGTCATGATGGCTGATGTAGACCCTGATGAAAGAATGGCAGAGATGGAAAGAAAGATCAATCTCCTAATGAAGGCGGTA
GAAGAGAGGGATCTTGAAATTGCCTATCTCAAGAATCAGGTCCAAAACAAAGAAACGGCTGAATCTAGCCAAACTCCTGCAGTAAGAAACAATGACAAGGGGAAAAATAT
CATCCAAGAGGAGCAACCGCCTCAACTAGCTTCAGTTGCTTCTTTATCCGTCCAACAACTACAGTACATGATCATGAGTTCTATCAGAGCTCAATATGGCGGACCCGCTC
AAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGGATTGACAATTTGAGGATGCCTGTAACGCCCCTACTTTTCTATGACTATAACTCCTAG
Protein sequenceShow/hide protein sequence
MESKKVASTVAVVSNSYMGPITRSRSKGVETSNDRTPDAMASNIIKRLDEASKGKVIVKDNPLFDQSTPALNQQRETSTPDVMSVMMADVDPDERMAEMERKINLLMKAV
EERDLEIAYLKNQVQNKETAESSQTPAVRNNDKGKNIIQEEQPPQLASVASLSVQQLQYMIMSSIRAQYGGPAQNPLTYSKPYTKRIDNLRMPVTPLLFYDYNS