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Tan0014939 (gene) of Snake gourd v1 genome

Gene IDTan0014939
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG03:49171036..49171215
RNA-Seq ExpressionTan0014939
SyntenyTan0014939
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158791.1 uncharacterized protein LOC111025258 [Momordica charantia]6.4e-1369.49Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQA+FGQPS+S+ +DA+KYVYN RMKE +SVREHVL+M VHFNV EVN+ V++E S
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]3.7e-1369.49Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQA+FGQPSSS  +DA+K+VYN RMKE  +VREHVLDM VHFN+ EVN  V++EKS
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]1.7e-1371.19Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQA+FGQPSSS  +DA+KYVYN RMKE  +VREHVLDM VHFN+VEVN  V++EK+
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

XP_038885834.1 uncharacterized protein LOC120076130 [Benincasa hispida]4.9e-1369.49Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M  L+ MFGQPS S+ +D++KY+YN  MKE ASVREHVL+M VHFNV EVNEVV+DEKS
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

XP_038904417.1 uncharacterized protein LOC120090784 [Benincasa hispida]1.1e-1276.36Show/hide
Query:  QAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        + MFGQ SSSV +DALKYV+NSRMKE  SVREHVLDM V+FN+ EVN VVIDEKS
Subjt:  QAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

TrEMBL top hitse value%identityAlignment
A0A5A7UUN7 Gag/pol protein2.0e-1269.49Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQ MFGQ S  + +DALKY+YN+RM E ASVREHVL+M VHFNVVE+N  VIDE S
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

A0A6J1CP29 uncharacterized protein LOC1110134179.0e-1370.18Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDE
        M SL+AMFG+PSS++ ++ALKYVYN  MKE  SVREHVLDM VHFN  EVNE  IDE
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDE

A0A6J1DWG6 uncharacterized protein LOC1110250211.2e-1267.8Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQA+FGQPS+++ +DA+KYVYN RMKE +SVREHVL+M VHFNV EVN+ V++E S
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

A0A6J1DWL0 uncharacterized protein LOC1110247341.5e-1267.8Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQ+MFGQPS    ++ALK+VYNSRMKE +SVREHVL++ VHFNV E N +VIDE+S
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

A0A6J1E205 uncharacterized protein LOC1110252583.1e-1369.49Show/hide
Query:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS
        M SLQA+FGQPS+S+ +DA+KYVYN RMKE +SVREHVL+M VHFNV EVN+ V++E S
Subjt:  MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCGTTACAGGCGATGTTTGGACAACCATCCTCATCGGTCCACTATGATGCACTCAAATACGTTTACAACTCCCGTATGAAGGAGGTAGCCTCTGTTAGGGAACA
TGTCCTTGACATGAGGGTGCACTTCAACGTGGTTGAAGTAAATGAGGTTGTCATAGATGAGAAAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCGTTACAGGCGATGTTTGGACAACCATCCTCATCGGTCCACTATGATGCACTCAAATACGTTTACAACTCCCGTATGAAGGAGGTAGCCTCTGTTAGGGAACA
TGTCCTTGACATGAGGGTGCACTTCAACGTGGTTGAAGTAAATGAGGTTGTCATAGATGAGAAAAGTTAG
Protein sequenceShow/hide protein sequence
MGSLQAMFGQPSSSVHYDALKYVYNSRMKEVASVREHVLDMRVHFNVVEVNEVVIDEKS