; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014964 (gene) of Snake gourd v1 genome

Gene IDTan0014964
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribosome production factor 1
Genome locationLG06:8814607..8824119
RNA-Seq ExpressionTan0014964
SyntenyTan0014964
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]3.0e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022943997.1 ribosome production factor 1 [Cucurbita moschata]2.4e-17393.07Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKNRD++PSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEP PRK P TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022971273.1 ribosome production factor 1 [Cucurbita maxima]1.8e-17393.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKNRD+IPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEP PRK P TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]1.1e-17393.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]2.5e-17594.28Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEE KNR IIPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDET+CKPDD+ELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
        SH+PELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein5.2e-17493.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X11.4e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X11.4e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE  PRKIP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like1.1e-17393.99Show/hide
Query:  MGEEKKN-RDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKR
        MGEEKKN RDIIPSMIKNKEKR EVHANLK QK+LEKRKRAKARDA+EKQALELGEEP PR IP TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKR

Query:  DMLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DMLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMK
        TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+ KENKKEAD+KS SKD KGEKV +QKV+ARLQECGPRFTMK
Subjt:  TSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1I6C8 ribosome production factor 18.8e-17493.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD
        MGEEKKNRD+IPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEP PRK P TIENTREVDETVCKPDD+ELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRD

Query:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  MLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 13.5e-7148.45Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF
        S IKNKE+R  +    K Q+R EK     A+   +K+   LG++  P+ +P TI+N R  DET   P+D+E+      DEF+S   +   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF                       S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 15.1e-7048.45Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF
        S IKNK++R  +   LK +KR +KR   K +   E++AL+  ++  P+++P TIEN R  DET   P+D+E+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 17.9e-7148.14Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF
        S IKNK++R  +    K Q+R EK     A+   +K+   LG++  P+ +P TI+N R  DET   P+D+E+      DEF+S   R   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF+                      S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 12.1e-7147.85Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEK----RKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLIT
        S IKNK++R  +   LK +KR EK    +KR K R+A       LG++  P+ +P TIEN R  DET   P D+E+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKRLEK----RKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F+                      S++KV   +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 17.9e-7148.14Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF
        S IKNK++R  +    K Q+R EK     A+   +K+   LG++  P+ +P TI+N R  DET   P+D+E+      DEF+S   +   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF                       S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein8.2e-3935.42Show/hide
Query:  KQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY
        ++AL+ G +P+P ++ +     R+  E   +  +  +   +  DE+++  + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE 
Subjt:  KQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY

Query:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ
Subjt:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ

Query:  RDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
         D+I FR+H Y      +K E   KS                  L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein5.0e-13772.51Show/hide
Query:  GEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDM
        G EK+N  I+PSMIKNK+KR++V+A  K++K+LEK+K+ +ARDAAEK+ALELGEEP  + IP TIENTRE DETVC+PDD+ELFA  DADEF+ +++R++
Subjt:  GEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDM

Query:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLI
        H+PELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIFE             +K++K +K  ++ +  RLQECGPRFT+KL+
Subjt:  HEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        +LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAGAAGAAGAACAGGGATATAATCCCATCAATGATAAAAAACAAGGAAAAGAGGGCAGAAGTGCATGCCAACCTCAAGAACCAGAAGAGGCTTGAGAAACG
CAAAAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACCTCTTCCTAGGAAGATTCCTCACACCATTGAGAACACAAGGGAGGTTGATG
AGACGGTTTGCAAACCTGATGATAAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGAGACATGTTGCCAAAAGTTCTAATTACTACTTGT
CGGTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCAGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTGGATGGCCTTCTAATTATTGGCTTACCTGAGGGTCCTACTGCCCATTTTAAGA
TATCAAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCGGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAGTCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTGACATTTCACAACCAACGGGATTTTATATTCTTCCGGCATCATCGATACATTTT
TGAAGGCAAGGAGAATAAAAAAGAGGCCGACACAAAAAGTAAGTCCAAGGATACCAAGGGCGAGAAAGTTTCTCAGCAGAAAGTAGTTGCACGGCTTCAGGAATGCGGTC
CTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCAAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGTAGAAGATTT
TTCTTATGA
mRNA sequenceShow/hide mRNA sequence
GGTTTTCGAAAGCAGCCCCCACGAATTCATCTTTTCTCTTCGTGTTGCAGAAGCTCACCGCCGGCTCCTTATCTCTTTCGTTCGTCGCCCCTCTCCTCTGTTCGACCCAA
CGCCGGCAGCCGACAAGCCAGCACACGTCGACATCTTCTATCCCGTCGTGCCTCCTTCTCTCCGCCGTCCAGCAACCCGCGACTGCAACCCACGATCTCTCCTCTCGTTC
TTCCGGCGGTTCCGGCATCTGAACGCCGAATCTAAATCGGTTCCGACACTTCCAGCCGCCGTATTTCCTTTCTCTTCCCTATCTGGATAGTCCCCTAGTGAAACCGGTCG
CCGTAGCTCATCGCCGATTGGGTCACGGCATCCAGATCCGAGCTCCACGCGCCGCCGCCGCTGCCGCCACCGTTTGGTTACTGCCGGAACTCACTCGTGTTAAGGGAGTT
GCTTGGAGCACGTGTTGAGCTCTTGAATCTTCGAATATCTAGGTTGATCAAGGAGTATAGATGGGAGAGGAGAAGAAGAACAGGGATATAATCCCATCAATGATAAAAAA
CAAGGAAAAGAGGGCAGAAGTGCATGCCAACCTCAAGAACCAGAAGAGGCTTGAGAAACGCAAAAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTG
GAGAAGAACCTCTTCCTAGGAAGATTCCTCACACCATTGAGAACACAAGGGAGGTTGATGAGACGGTTTGCAAACCTGATGATAAAGAGCTATTTGCTGGAAATGATGCT
GATGAATTTAGTTCCATCATAAAGCGAGACATGTTGCCAAAAGTTCTAATTACTACTTGTCGGTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCAGT
GATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGA
GAAAATTGGATGGCCTTCTAATTATTGGCTTACCTGAGGGTCCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACC
AGCCATGAGCCGGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAGTCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCG
AGTTGTGACATTTCACAACCAACGGGATTTTATATTCTTCCGGCATCATCGATACATTTTTGAAGGCAAGGAGAATAAAAAAGAGGCCGACACAAAAAGTAAGTCCAAGG
ATACCAAGGGCGAGAAAGTTTCTCAGCAGAAAGTAGTTGCACGGCTTCAGGAATGCGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCA
AAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGTAGAAGATTTTTCTTATGACATTCTCAATGGACTTCATTACTTCTATTCCCGGGGTGTAA
AAGTCAGGTTCATATAATATCATGGGCGGATTGTTGATCAAATATGAATCTCTTTTTCGGCCTGGTTGTAGGTTAGAAGTGCATTTACTTTTGACTATTAAAAATTTTGT
AGCATTGACTTAAAGGTTGAGTTTTGCTTCAGGCTATATATTCGTTCTCTTATCTTATCTGGGGGGTTTAAAAGGGCCAAGATTCACAAACTTAGAGAATGCGAATTGGC
ATGTGAGGGCCTAGTTTAATAGTCTTCTAAAGTTTTGATTTTGTGTTTAGCAGTCCTTTGATCTATTTGATACACAGTTGAGAGTCCAAGGAGTTGTTAACCACTTTAAA
GCTCAAGTATTTATTAGTTACACTGCTAAAAAGTATAGGTACTTGTTAGTATTGAAGTCTATTTTGAAATTGAGATATGGGGTGCATAACTCAACTAAATTACCATGCCA
ATAATTATTAAACAAAAGAGGTGGCAACAGAG
Protein sequenceShow/hide protein sequence
MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPLPRKIPHTIENTREVDETVCKPDDKELFAGNDADEFSSIIKRDMLPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRF
FL