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Tan0014978 (gene) of Snake gourd v1 genome

Gene IDTan0014978
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationLG06:16666634..16666891
RNA-Seq ExpressionTan0014978
SyntenyTan0014978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8550659.1 hypothetical protein F0562_002343 [Nyssa sinensis]4.5e-1673.91Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
        V+QKTKEVAGKV ETAQD+A KAKQT Q+AWGSVKDTTQ+IKE V GKAEESKE+IK  AE +K+S+ +
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
XP_008457975.1 PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]4.9e-2387.32Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQKTK+VAGKVSETAQD+AGKAKQTV++AWGSVKDTTQ IKEKVVGKAEESKEAIKDTAEN+K +IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
XP_011659168.1 uncharacterized protein At4g13230 [Cucumis sativus]2.9e-2387.32Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQ+TKEVAGKVSETAQD+AGKAKQTV++AWGSVKDTTQ IK+KVVGKAEESKEAIKDTAEN+KK+IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
XP_022152517.1 uncharacterized protein At4g13230 [Momordica charantia]9.9e-2491.55Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQ IKEKVVGKAEESKEAIKDTA+N+K  IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
XP_038897424.1 uncharacterized protein At4g13230 [Benincasa hispida]4.5e-2491.55Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQKTKEVAGKVSETAQDLAGKAKQTVQ+AWGSVKDTTQ IKEKVVGKAEESKEAIKDTA+NLKK+IK++C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
TrEMBL top hitse value%identityAlignment
A0A0A0K9U4 Uncharacterized protein1.4e-2387.32Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQ+TKEVAGKVSETAQD+AGKAKQTV++AWGSVKDTTQ IK+KVVGKAEESKEAIKDTAEN+KK+IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
A0A1S3C7D4 uncharacterized protein At4g132302.4e-2387.32Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQKTK+VAGKVSETAQD+AGKAKQTV++AWGSVKDTTQ IKEKVVGKAEESKEAIKDTAEN+K +IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
A0A5B7AK94 Uncharacterized protein (Fragment)2.0e-1775.36Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
        VT K+K+VAGKVSETAQDLA KAKQT Q+AWGSVKDTTQ+IKE V GKAEESK++IKD+AEN+K+S+ +
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
A0A5J5C607 Uncharacterized protein2.2e-1673.91Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
        V+QKTKEVAGKV ETAQD+A KAKQT Q+AWGSVKDTTQ+IKE V GKAEESKE+IK  AE +K+S+ +
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
A0A6J1DGG7 uncharacterized protein At4g132304.8e-2491.55Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
        VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQ IKEKVVGKAEESKEAIKDTA+N+K  IKS+C
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC
SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132301.2e-0847.83Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
        V +K  E A  +S+ A +L  KAK T +EAW  VKDTT++IK+ V GK EE+KE+IK TA+ +++S+ +
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein8.7e-1047.83Show/hide
Query:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS
        V +K  E A  +S+ A +L  KAK T +EAW  VKDTT++IK+ V GK EE+KE+IK TA+ +++S+ +
Subjt:  VTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTGACTCAAAAAACAAAGGAAGTTGCAGGGAAAGTGTCTGAAACAGCACAAGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGAGGCATGGGGATCAGTGAA
GGATACAACTCAAGAAATCAAAGAGAAGGTGGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATTAAAGACACTGCAGAGAACCTCAAAAAGAGTATCAAGTCAAGCTGTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGATCGTGACTCAAAAAACAAAGGAAGTTGCAGGGAAAGTGTCTGAAACAGCACAAGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGAGGCATGGGGATCAGTGAA
GGATACAACTCAAGAAATCAAAGAGAAGGTGGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATTAAAGACACTGCAGAGAACCTCAAAAAGAGTATCAAGTCAAGCTGTT
GA
Protein sequenceShow/hide protein sequence
MIVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQEIKEKVVGKAEESKEAIKDTAENLKKSIKSSC