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Tan0014980 (gene) of Snake gourd v1 genome

Gene IDTan0014980
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG06:59931507..59931854
RNA-Seq ExpressionTan0014980
SyntenyTan0014980
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR45251.1 hypothetical protein CICLE_v10003098mg [Citrus clementina]3.3e-0672.09Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTE
        +NFGLWQVQVKDVLIQSGLHKALKG+PS   P   SG G  T+
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTE

KAF6150548.1 hypothetical protein GIB67_030349 [Kingdonia uniflora]1.2e-1144Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPE-KLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNC----PNRASSSKGSGSDANMVSLVKGDG
        +NFGLWQ+ V+D+LIQ GL KALKG+P   +P+  + G       SG  S +  +K  CW CG+SGH + +C     NRASS++GS +D N ++ V  +G
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPE-KLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNC----PNRASSSKGSGSDANMVSLVKGDG

PHT58503.1 hypothetical protein CQW23_00866 [Capsicum baccatum]3.3e-0656.67Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWE
        +NFGLWQVQVKDVLIQSGLHK LK RP+ G  +K   D + +ESS  S K  +  +  WE
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWE

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]5.3e-1251.09Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDANMVSLVK
        +NFGLWQVQVKDVLIQS LHKALKGRPS G  EKLS DG P ESSGGSS+   +    +E      ++     R S +K   ++ + +S  K
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDANMVSLVK

XP_022154929.1 uncharacterized protein LOC111022075 [Momordica charantia]9.0e-1278Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSK
        +NFGLWQVQVKDV+IQSGLHKALKGRPS    EKLSGDG P ESS GS +
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSK

TrEMBL top hitse value%identityAlignment
A0A2G2XLY2 Uncharacterized protein1.6e-0656.67Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWE
        +NFGLWQVQVKDVLIQSGLHK LK RP+ G  +K   D + +ESS  S K  +  +  WE
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWE

A0A2N9GSE2 Uncharacterized protein9.4e-0737.27Show/hide
Query:  NFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGD------------GDPT---ESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDAN
        NFGLWQ +VKD+L+Q GL KAL G+     PEK++ D            G  T   +S+ G SK   +   C++C + GHMK+ CP      + S +  N
Subjt:  NFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGD------------GDPT---ESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDAN

Query:  MVSLVKGDGD
        +V+  + DGD
Subjt:  MVSLVKGDGD

A0A6J1CG82 uncharacterized protein LOC1110105212.5e-1251.09Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDANMVSLVK
        +NFGLWQVQVKDVLIQS LHKALKGRPS G  EKLS DG P ESSGGSS+   +    +E      ++     R S +K   ++ + +S  K
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDANMVSLVK

A0A6J1DNQ5 uncharacterized protein LOC1110220754.3e-1278Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSK
        +NFGLWQVQVKDV+IQSGLHKALKGRPS    EKLSGDG P ESS GS +
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSK

A0A7J7M716 Uncharacterized protein5.7e-1244Show/hide
Query:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPE-KLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNC----PNRASSSKGSGSDANMVSLVKGDG
        +NFGLWQ+ V+D+LIQ GL KALKG+P   +P+  + G       SG  S +  +K  CW CG+SGH + +C     NRASS++GS +D N ++ V  +G
Subjt:  MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPE-KLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNC----PNRASSSKGSGSDANMVSLVKGDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTGGCTTGTGGCAAGTGCAAGTCAAAGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACCAAGTTGTGGTGTTCCTGAAAAGTTAAGCGG
TGATGGTGATCCAACGGAGTCTAGTGGTGGTTCCAGTAAAGACTTCGTGCAAAAGAAAGGTTGTTGGGAATGCGGGCGGTCTGGACACATGAAAAAGAATTGTCCTAACA
GAGCAAGTTCGTCAAAAGGCTCTGGGTCGGATGCTAACATGGTCTCTCTCGTCAAGGGAGATGGTGACACCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTGGCTTGTGGCAAGTGCAAGTCAAAGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACCAAGTTGTGGTGTTCCTGAAAAGTTAAGCGG
TGATGGTGATCCAACGGAGTCTAGTGGTGGTTCCAGTAAAGACTTCGTGCAAAAGAAAGGTTGTTGGGAATGCGGGCGGTCTGGACACATGAAAAAGAATTGTCCTAACA
GAGCAAGTTCGTCAAAAGGCTCTGGGTCGGATGCTAACATGGTCTCTCTCGTCAAGGGAGATGGTGACACCTTCTGA
Protein sequenceShow/hide protein sequence
MNFGLWQVQVKDVLIQSGLHKALKGRPSCGVPEKLSGDGDPTESSGGSSKDFVQKKGCWECGRSGHMKKNCPNRASSSKGSGSDANMVSLVKGDGDTF