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Tan0014983 (gene) of Snake gourd v1 genome

Gene IDTan0014983
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:50487532..50488213
RNA-Seq ExpressionTan0014983
SyntenyTan0014983
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273122.1 unnamed protein product [Prunus armeniaca]1.8e-0468.85Show/hide
Query:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGGGC
        S G+FLL +I +S+SLISM+IFACGD+   S KK+Y GGGGG A   GGGGGCGGGGGGGC
Subjt:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGGGC

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0861.9Show/hide
Query:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDG--GGGGGAGCG---GGGGGCGGGGGG
        M R +    G GL DVT+  S GL LL+ + LS+SL+SMIIFACGD+SSD+K+K+  G  GGGGG GCG   GGGGGCGGGGGG
Subjt:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDG--GGGGGAGCG---GGGGGCGGGGGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0761.54Show/hide
Query:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGG
        M RP+    G GL DVT+  S GL LL+ I +S+SL+SMIIFACGD+S  +K+K+   GGGGGAGC  GGGGCGGGGG
Subjt:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0767.9Show/hide
Query:  MARPMLNT--HGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGG
        M RP+L     G G +DVT+V S GLFLLS I LSISL+SMIIFACG NS+D K+K  DGGGG G G GGGGGGCGGG GG
Subjt:  MARPMLNT--HGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGG

ONI16710.1 hypothetical protein PRUPE_3G116900 [Prunus persica]1.8e-0467.92Show/hide
Query:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGC
        S G+FLL +I LS+SLISM+IFACGD+   S KK+Y G G GG GCGGGGGGC
Subjt:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGC

TrEMBL top hitse value%identityAlignment
A0A061DKB8 Uncharacterized protein2.5e-0457.89Show/hide
Query:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGG-GGCGG
        MAR ++N  G G      V S GLFLL +I  S+S+ISM+IFACGDN+S  K +   G GGGG GCGGGG GGCGG
Subjt:  MARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGG-GGCGG

A0A0L9TEF9 Uncharacterized protein1.1e-0455.95Show/hide
Query:  MARPMLNTHG---RGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGG-GGAGCGGGGGGCGGGGGGG
        MAR  +   G    G E+  V+ SS +FL  +I  S+S+IS+IIFACGD++ D+K+++ DGGGG GG G GGGGGGCGGGGGGG
Subjt:  MARPMLNTHG---RGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGG-GGAGCGGGGGGCGGGGGGG

A0A0S3SAT1 Uncharacterized protein1.4e-0454.32Show/hide
Query:  MARPMLNTHG---RGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGG-GGAGCGGGGGGCGGGG
        MAR  +   G    G E+  V+ SS +FL  +I  S+S+IS+IIFACGD++ D+K+++ DGGGG GG G GGGGGGCGGGG
Subjt:  MARPMLNTHG---RGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGG-GGAGCGGGGGGCGGGG

A0A6J5WYX6 Uncharacterized protein8.5e-0568.85Show/hide
Query:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGGGC
        S G+FLL +I +S+SLISM+IFACGD+   S KK+Y GGGGG A   GGGGGCGGGGGGGC
Subjt:  SSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGGGC

A5B1D1 Uncharacterized protein4.2e-0456.96Show/hide
Query:  NTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYD----GGGGGGAGCGGGGGGCGGGGGGGC
        N   +GL  + +V S GLFLL +IF+++S+ISM+IFAC D++S S++KK      GG GGG GCG GGGGCGGGGG GC
Subjt:  NTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYD----GGGGGGAGCGGGGGGCGGGGGGGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAAATGGTTCAAAATTTATCATTCAAAAGTGACAAAATGGCAAGGCCAATGCTTAACACCCATGGCCGTGGCTTAGAAGATGTCACCGTTGTTGGCTCCAGTGG
TTTATTTTTACTTTCAATCATTTTTCTATCAATTTCTCTCATATCAATGATCATATTTGCTTGCGGAGATAACTCTAGTGATTCTAAAAAGAAAAAATATGATGGTGGCG
GTGGTGGCGGCGCCGGCTGTGGTGGGGGAGGTGGAGGCTGCGGCGGCGGTGGCGGTGGCGGATGTTAA
mRNA sequenceShow/hide mRNA sequence
AATCAAATGAGTAAATTACAGAGATATCTTCCGGGAAACAACATTTTTCCAATGTTCAAATGGTAAGAGGAGAAGATACTTTTTAAACAAGAAACCCATCCTTTACTTTC
TCTATATATAAGTCATTCATGTCTAAAATGGTTCAAAATTTATCATTCAAAAGTGACAAAATGGCAAGGCCAATGCTTAACACCCATGGCCGTGGCTTAGAAGATGTCAC
CGTTGTTGGCTCCAGTGGTTTATTTTTACTTTCAATCATTTTTCTATCAATTTCTCTCATATCAATGATCATATTTGCTTGCGGAGATAACTCTAGTGATTCTAAAAAGA
AAAAATATGATGGTGGCGGTGGTGGCGGCGCCGGCTGTGGTGGGGGAGGTGGAGGCTGCGGCGGCGGTGGCGGTGGCGGATGTTAATGACATGCTTATTTGGACAGCGCG
TGTATGTAGAATATGGTTTGAGAATGTTTAAATGTTATTTGTTTTTCATATTGGATTAAAATTGTGTTATTTGAAATGATTTGAATCTATATTAATCTATTTGATTGAAT
GTTTGGGATTATTCAACTTTAATTTTATTTTTTAAAGGAAAATTCATGTTACTTTGAAGTTTTGAATAGCGTGACTTATTTCTTTGCCTTAGGTTCTCTTCATTTTTAGG
CCACATATAATTTTATGTATTT
Protein sequenceShow/hide protein sequence
MSKMVQNLSFKSDKMARPMLNTHGRGLEDVTVVGSSGLFLLSIIFLSISLISMIIFACGDNSSDSKKKKYDGGGGGGAGCGGGGGGCGGGGGGGC