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Tan0014995 (gene) of Snake gourd v1 genome

Gene IDTan0014995
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein GIGANTEA-like isoform X1
Genome locationLG01:78395988..78412064
RNA-Seq ExpressionTan0014995
SyntenyTan0014995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143670.1 protein GIGANTEA-like isoform X2 [Momordica charantia]2.3e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
XP_022143671.1 protein GIGANTEA-like isoform X3 [Momordica charantia]2.3e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
XP_022935847.1 protein GIGANTEA-like isoform X2 [Cucurbita moschata]2.3e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
XP_022935848.1 protein GIGANTEA-like isoform X3 [Cucurbita moschata]2.3e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
XP_022976905.1 protein GIGANTEA-like isoform X3 [Cucurbita maxima]7.8e-0848.81Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQFVVGESSKPI---NSKNEEIHRSYAELLGKSSKTNE
        MATSSERWIDRLQLSSLFWPPPDDDQQRK     H   Q          ++   ++PI     KN E  RS +  +  +S TN+
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQFVVGESSKPI---NSKNEEIHRSYAELLGKSSKTNE
TrEMBL top hitse value%identityAlignment
A0A6J1CQ08 protein GIGANTEA-like isoform X11.1e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
A0A6J1F5V5 protein GIGANTEA-like isoform X11.1e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
A0A6J1IKR9 protein GIGANTEA-like isoform X33.8e-0848.81Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQFVVGESSKPI---NSKNEEIHRSYAELLGKSSKTNE
        MATSSERWIDRLQLSSLFWPPPDDDQQRK     H   Q          ++   ++PI     KN E  RS +  +  +S TN+
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQFVVGESSKPI---NSKNEEIHRSYAELLGKSSKTNE
A0A6J1INH7 protein GIGANTEA-like isoform X11.1e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
A0A6J1IPZ2 protein GIGANTEA-like isoform X21.1e-07100Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
        MATSSERWIDRLQLSSLFWPPPDDDQQRK
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRK
SwissProt top hitse value%identityAlignment
Q9AWL7 Protein GIGANTEA2.2e-0544.9Show/hide
Query:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF
        M+ S+E+WID LQ SSLFWPPP D QQ++  +  ++         S+QF
Subjt:  MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF
Q9SQI2 Protein GIGANTEA1.1e-0447.92Show/hide
Query:  ATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF
        ++SSERWID LQ SSL WPPP D QQ K  +  +  ++   + +S+QF
Subjt:  ATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF
Arabidopsis top hitse value%identityAlignment
AT1G22770.1 gigantea protein (GI)7.8e-0647.92Show/hide
Query:  ATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF
        ++SSERWID LQ SSL WPPP D QQ K  +  +  ++   + +S+QF
Subjt:  ATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGTCAAGTGAGAGATGGATCGATAGACTTCAATTATCCTCCTTGTTTTGGCCTCCCCCAGATGATGATCAGCAACGAAAGGGCTTTTTGGCTATACATCTTAT
ACTTCAAAATGTGAGGAAAATGTCTTCCAAGCAGTTTGTGGTTGGAGAATCTTCCAAGCCGATTAATAGTAAAAATGAAGAGATTCATAGAAGTTATGCTGAGTTGTTGG
GAAAATCATCAAAGACGAATGAAAGAAAAAAAAGCAGTGAAGAAGACAGGGTGTTACTTTCCTCCTCATTTCCTGTTGACTCAGATGATGAATCAGAAGTGAGTGTTAGT
AATGATATTAATGAATTTATTGACGAAGATTCATTTGCTCCAGATTTTGCTTTAATTTTTCAGGATTGTGGTAAAGATTCTGCAGCACAGTCGGTTCTCGATGAAGTTCC
ATTCTCTACTTCAGTTTTAGTTCCAATCAAATTCTCCTCTCTTATTGAAGGTTGTGATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGTCAAGTGAGAGATGGATCGATAGACTTCAATTATCCTCCTTGTTTTGGCCTCCCCCAGATGATGATCAGCAACGAAAGGGCTTTTTGGCTATACATCTTAT
ACTTCAAAATGTGAGGAAAATGTCTTCCAAGCAGTTTGTGGTTGGAGAATCTTCCAAGCCGATTAATAGTAAAAATGAAGAGATTCATAGAAGTTATGCTGAGTTGTTGG
GAAAATCATCAAAGACGAATGAAAGAAAAAAAAGCAGTGAAGAAGACAGGGTGTTACTTTCCTCCTCATTTCCTGTTGACTCAGATGATGAATCAGAAGTGAGTGTTAGT
AATGATATTAATGAATTTATTGACGAAGATTCATTTGCTCCAGATTTTGCTTTAATTTTTCAGGATTGTGGTAAAGATTCTGCAGCACAGTCGGTTCTCGATGAAGTTCC
ATTCTCTACTTCAGTTTTAGTTCCAATCAAATTCTCCTCTCTTATTGAAGGTTGTGATATTTGATCGAAGGAGATCAATCTGTTATTACCTCCAGCAATTACCAGTATTA
GACAGCTGTTTGTGATTAGTTTTGAAGTCTTTCATGAAGATTATTTCCTGGAATACCCGAGGCTTAGGGGATATCTCAAAGAGAGTAGTGTTGAAGAAGTTTTTGCAGCA
TCTCCCAGATTTGGTTTGAATTTTGGAGACTAAGATTGCTTCATTTGATCAGCGTTTAATAAAATCTTTATGGAGTTTCGTAGATGTCGGTTGGGTTAATGTGCGATCGT
GGGAAAAATCAGGAGGATTATCAGTAATGTGGGATGAGAGCAAACTGAAAATTTTGGAATTTCTTCAAGATGGTTACACTCTCTCAGTAAAAGTCTCTTTCCAACAACAA
AAAGACTGTTGGGTTACAAATGTTTATGATCCCAATGATCATAGGGAAAGAAAATTCCTGTGGGAAGAATTGCAATCACCATCCTTGTACTGTGAAGGCCCTTCGTGTAT
TGGAGGATCTTTTGACGAAGAAGACTATTGGTAAGGGGCATGAATCTGGAGGTCTCTACATTTTTTAATCACAAATGCCCACAACCGTTCCTTGCTCTAAAGTATCCTCT
CCCTTTGAAGAATATTGTTGTCTGGGTCATCCATCTTTTTTCGTTTTGAAAAGTCTTCTCCTCAATTTAATCACTTGTCTTCTTTAGATTGCGAGTCATGTTAGTTCGCT
AAATTTCATCGTCTGAGTCTGTATTCCAGAGTCAATAAACGAGCTAGTGCTCCATTTGAATTAGTTCATTCTGATGTTTGGGGTCCTTGTCCTGTTGAGTCTAAGAGAGG
GTTTCGGTATTTTGTTACTTTTATCGATGATTTTTCT
Protein sequenceShow/hide protein sequence
MATSSERWIDRLQLSSLFWPPPDDDQQRKGFLAIHLILQNVRKMSSKQFVVGESSKPINSKNEEIHRSYAELLGKSSKTNERKKSSEEDRVLLSSSFPVDSDDESEVSVS
NDINEFIDEDSFAPDFALIFQDCGKDSAAQSVLDEVPFSTSVLVPIKFSSLIEGCDI