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Tan0015100 (gene) of Snake gourd v1 genome

Gene IDTan0015100
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG05:6611153..6611632
RNA-Seq ExpressionTan0015100
SyntenyTan0015100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RHN71616.1 putative transcription factor interactor and regulator CCHC(Zn) family [Medicago truncatula]7.2e-1250Show/hide
Query:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--VAPSHKKQRIQVITKCSRCKGTGHNARSCRG
        ++ Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR+D DE     S K +R Q   +C+RCK  GHN R+C+G
Subjt:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--VAPSHKKQRIQVITKCSRCKGTGHNARSCRG

XP_014499554.1 uncharacterized protein LOC106760657 [Vigna radiata var. radiata]7.2e-1239.62Show/hide
Query:  YSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPITEV
        Y+  I P+NG  LWPR+  EPLLPP  ++PPGRPK+ RRR+ DE     K  +  +  KCS C   GHN RSC+   +   T   R     G     +  
Subjt:  YSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPITEV

Query:  EIGATS
         +G+ S
Subjt:  EIGATS

XP_028064760.1 uncharacterized protein LOC114267884 [Camellia sinensis]3.2e-1245.1Show/hide
Query:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPI------TQSSTKNRRDR-IF
        ++ Y   I P+NG   WP+T  EPLLPP+++RP GRP++QR RD+DE     K QR     KCS+    GHN R+C+GP+        S +KN R R  F
Subjt:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPI------TQSSTKNRRDR-IF

Query:  MG
        MG
Subjt:  MG

XP_028112221.1 uncharacterized protein LOC114310445 [Camellia sinensis]4.2e-1235.56Show/hide
Query:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPI---TQSSTKNRRDRIFMGLT
        +  Y   I P+NG  LWP+T  +PLLPPK++RP GRP + R RD DE    +K QR Q   KCS+C   GHN R+C+ P+   T   +    +  FMG  
Subjt:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPI---TQSSTKNRRDRIFMGLT

Query:  IPITEVEIGATSERMMSEDGRQNNEGNIGTQRFTN
              E G++   +     R+      G +  T+
Subjt:  IPITEVEIGATSERMMSEDGRQNNEGNIGTQRFTN

XP_031397476.1 uncharacterized protein LOC116208272 [Punica granatum]3.2e-1235.25Show/hide
Query:  VYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGP-ITQSSTKNRRDRIFMGLTIPIT
        +Y +FIKP  G   W ++  +P+ PPK++RPPGRPK+QR++  +E    +K +R      C +C G+ HN R+C+GP I  SS K  ++       +PI 
Subjt:  VYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGP-ITQSSTKNRRDRIFMGLTIPIT

Query:  EVEIGATSERMMSEDGRQNNEG
              T+  + S DG  + +G
Subjt:  EVEIGATSERMMSEDGRQNNEG

TrEMBL top hitse value%identityAlignment
A0A1S3U0L8 uncharacterized protein LOC1067606573.5e-1239.62Show/hide
Query:  YSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPITEV
        Y+  I P+NG  LWPR+  EPLLPP  ++PPGRPK+ RRR+ DE     K  +  +  KCS C   GHN RSC+   +   T   R     G     +  
Subjt:  YSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPITEV

Query:  EIGATS
         +G+ S
Subjt:  EIGATS

A0A2N9H075 SWIM-type domain-containing protein2.9e-1135.07Show/hide
Query:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPI
        ++VYS  I P+ G   W ++   P  PP + RPPGRPK+ RRRD DE    HK  R+    KC +C   GHN+RSC   IT  +T  RR R+        
Subjt:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPI

Query:  TEVEIGATSERMMSEDGRQNNEGNIGTQRFTNQP
                 +    E     N+G+  +Q  ++QP
Subjt:  TEVEIGATSERMMSEDGRQNNEGNIGTQRFTNQP

A0A396J0S1 Putative transcription factor interactor and regulator CCHC(Zn) family3.5e-1250Show/hide
Query:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--VAPSHKKQRIQVITKCSRCKGTGHNARSCRG
        ++ Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR+D DE     S K +R Q   +C+RCK  GHN R+C+G
Subjt:  MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--VAPSHKKQRIQVITKCSRCKGTGHNARSCRG

A0A6A2Y251 MULE domain-containing protein3.5e-1246.51Show/hide
Query:  MNVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAP-SHKKQRIQVITKCSRCKGTGHNARSCRGPITQSS
        M++YS FI PV G   W P  T+EP+LPP +RRPPGRP + RRR+VDE  P +H+  +  V   C +C G+GHN R+ +G +++++
Subjt:  MNVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAP-SHKKQRIQVITKCSRCKGTGHNARSCRGPITQSS

A0A6P8DW92 uncharacterized protein LOC1162082721.6e-1235.25Show/hide
Query:  VYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGP-ITQSSTKNRRDRIFMGLTIPIT
        +Y +FIKP  G   W ++  +P+ PPK++RPPGRPK+QR++  +E    +K +R      C +C G+ HN R+C+GP I  SS K  ++       +PI 
Subjt:  VYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGP-ITQSSTKNRRDRIFMGLTIPIT

Query:  EVEIGATSERMMSEDGRQNNEG
              T+  + S DG  + +G
Subjt:  EVEIGATSERMMSEDGRQNNEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGTTTACTCCTACTTCATCAAACCAGTCAACGGTCACCCTTTATGGCCAAGAACCACATTAGAACCTTTACTACCACCTAAGATCCGAAGGCCTCCTGGCAGACC
GAAGAGGCAGAGAAGAAGAGATGTTGATGAAGTTGCACCGTCTCATAAAAAGCAACGTATTCAAGTCATTACCAAGTGTAGTCGATGTAAAGGTACAGGACATAATGCTA
GGTCTTGTAGAGGTCCAATAACACAGAGTTCAACAAAGAATAGAAGAGATAGAATCTTCATGGGATTGACCATTCCTATTACTGAGGTTGAAATTGGAGCTACAAGTGAG
CGAATGATGTCGGAAGATGGTAGACAGAACAATGAAGGCAATATTGGAACCCAACGATTTACAAATCAACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGTTTACTCCTACTTCATCAAACCAGTCAACGGTCACCCTTTATGGCCAAGAACCACATTAGAACCTTTACTACCACCTAAGATCCGAAGGCCTCCTGGCAGACC
GAAGAGGCAGAGAAGAAGAGATGTTGATGAAGTTGCACCGTCTCATAAAAAGCAACGTATTCAAGTCATTACCAAGTGTAGTCGATGTAAAGGTACAGGACATAATGCTA
GGTCTTGTAGAGGTCCAATAACACAGAGTTCAACAAAGAATAGAAGAGATAGAATCTTCATGGGATTGACCATTCCTATTACTGAGGTTGAAATTGGAGCTACAAGTGAG
CGAATGATGTCGGAAGATGGTAGACAGAACAATGAAGGCAATATTGGAACCCAACGATTTACAAATCAACCATAG
Protein sequenceShow/hide protein sequence
MNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAPSHKKQRIQVITKCSRCKGTGHNARSCRGPITQSSTKNRRDRIFMGLTIPITEVEIGATSE
RMMSEDGRQNNEGNIGTQRFTNQP