| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-234 | 46.96 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
+SSA + +LA+DKL G+NY SWKN IN + + DD++FVL E+CPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+A MN A IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K A KG F N + P
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
Query: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I Q
Subjt: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
Query: LSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
LS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLCL
Subjt: LSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
Query: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
FVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S VV +S++ P+ L PRRSGRV R
Subjt: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
Query: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG--------------------
YM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG--------------------
Query: --------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCV
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PCV
Subjt: --------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCV
Query: YKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLSK
YK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LSK
Subjt: YKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLSK
Query: DQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR---
+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: DQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR---
Query: ------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: ------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-216 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-216 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-216 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-216 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 6.9e-217 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| A0A5A7SNP8 Gag/pol protein | 3.6e-234 | 46.96 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
+SSA + +LA+DKL G+NY SWKN IN + + DD++FVL E+CPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+A MN A IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K A KG F N + P
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
Query: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I Q
Subjt: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
Query: LSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
LS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLCL
Subjt: LSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
Query: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
FVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S VV +S++ P+ L PRRSGRV R
Subjt: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
Query: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG--------------------
YM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG--------------------
Query: --------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCV
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PCV
Subjt: --------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCV
Query: YKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLSK
YK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LSK
Subjt: YKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLSK
Query: DQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR---
+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: DQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR---
Query: ------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: ------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| A0A5A7U869 Gag/pol protein | 1.4e-214 | 49.02 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K A KG FH N + P
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIP---------------------
Query: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
+ +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I Q
Subjt: NSGREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQ
Query: LS-------------------------------------KTVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
LS V+TAVYILN VPSKSV +TP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLCL
Subjt: LS-------------------------------------KTVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCL
Query: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
FVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: FVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDR
Query: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAINGVYVLQFCLGACGSTG---------------------------------W-----------
YM L ET + D D EDPLT+ +AM DV KDEWIKA+N L+ L A G T W
Subjt: YMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAINGVYVLQFCLGACGSTG---------------------------------W-----------
Query: -----------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGN--------------
GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PCVYK+I++K+VAFLVLYV DILL GN
Subjt: -----------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGN--------------
Query: --------------------------------------------ENSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICY
+NSK+GLLPFRHGV LSK+QCPKTPQDV+ MR IPYASAIGSLMYAMLCTRPDICY
Subjt: --------------------------------------------ENSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICY
Query: AVGIVNRYQSNSGLDH
AVGIV+RYQSN GL H
Subjt: AVGIVNRYQSNSGLDH
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| A0A5A7VH46 Gag/pol protein | 2.4e-214 | 46.92 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE ++TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HF++AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIPNSGREEESRGLIPGSRCERFK
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K A KG FH N + P E++ E+FK
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKDVAEKGKGFHRNGADIGRGGIPNSGREEESRGLIPGSRCERFK
Query: EYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQLSK-------------------------------------TVETAVYILNNVPSKSVC
EYK EVEN L K++KT R DR GEYMD++FQ+Y++E I QLS V+TAVYILN VPSKSV
Subjt: EYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITPQLSK-------------------------------------TVETAVYILNNVPSKSVC
Query: ETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSA
ETP ++ +G K SL HFRIWGC AHVL +NPKKLEPRSKLCLFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S
Subjt: ETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSA
Query: KVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDRYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------
+VV S VV +S++ P+ L PRRSGRV RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N
Subjt: KVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRDRYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------
Query: -------------------GVYVLQFCLGACGSTG---------------------------------W----------------------------GQE
V Q L A G T W GQE
Subjt: -------------------GVYVLQFCLGACGSTG---------------------------------W----------------------------GQE
Query: QKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGN----------------------------------
QK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PCVYK+I++K+VAFLVLYV DILL N
Subjt: QKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGN----------------------------------
Query: ------------------------ENSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTW
+NSK+GLLPFRHGV LSK+QCPKTPQDV+ MR + +L M TR D G + L +T
Subjt: ------------------------ENSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTW
Query: GFDLTYGIQIRLFGPIRILGNPLGVDLHYEWRSRVWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
F + G + L + VWRSIKQGCIADSTMEAEY ACE AKE VWLRKF+ DLEVVPNM+ PITL+CD G
Subjt: GFDLTYGIQIRLFGPIRILGNPLGVDLHYEWRSRVWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| A0A5D3CPJ6 Gag/pol protein | 6.9e-217 | 40.08 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+ + DD++FVL EECPQ+P++ +R+VR Y+RW +ANEKA+ YI+AS+S+VLAKKHE M+TA+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTIFVTDDIKFVLSEECPQMPSSTPSRSVRVAYDRWIRANEKAKVYIIASMSDVLAKKHELMVTAKEIMESLQE
Query: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
MFGQ S+Q+ HD+LKY++NARM EG+ VREHVL+MM HFN+AEMNGA IDE+SQ SFILE+LP+SFLQ R N VMNKI+YTLTTLLNELQ F+SL ++K
Subjt: MFGQQSFQVWHDSLKYVFNARMKEGSFVREHVLDMMTHFNLAEMNGASIDESSQESFILETLPKSFLQLRINVVMNKISYTLTTLLNELQNFQSLNRVKA
Query: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
+ EANVA R +HRGSTSGTK + S K + K+G K + AA KK K +AEK K
Subjt: SESEANVA--YRSYHRGSTSGTKPVAPSRPKGKKRMKRG----KTDRGAAHKGKKVKD---------------------VAEKGKG--------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
++NG +I + N+
Subjt: HRNGADIGRGGIPNS-------------------------------------------------------------------------------------
Query: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
R +E L+ C E+FKEYK EVEN L K++KT R DRGGEYMD++FQ+Y++E I
Subjt: ---GREEESRGLIPGSRC-------------------------------------ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEITP
Query: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
QLS V+TAVYILN VPSKSV ETP ++ +G K SL HFRIWGCPAHVL +NPKKLEPRSKLC
Subjt: QLSK-------------------------------------TVETAVYILNNVPSKSVCETPFEVLSGCKSSLHHFRIWGCPAHVLVSNPKKLEPRSKLC
Query: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
LFVGYPK TRGG FYDPK N+V VSTNATFLEEDH+R+H PRSK VLNE+ S +VV S T VV +S++ P+ L PRRSGRV
Subjt: LFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMD----STSAKVVNGASTSTSVVDPSTSSQIRSPE-LGMPRRSGRVVRQRD
Query: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
RYM L ET + D D EDPLT+ +AM DV KDEWIKA+N GV ++ + GA G
Subjt: RYMGLAETSVIAPDDDCEDPLTYDQAMVDVGKDEWIKAIN-------------------GV------YVLQFCLGACGSTG-------------------
Query: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
W GQEQK+C+L+RSIYGLKQASRSWNIRFD AIKSY FDQ VD PC
Subjt: ---------------------------W----------------------------GQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPC
Query: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
VYK+I++K+VAFLVLYV DILL GN +NSK+GLLPFRHGV LS
Subjt: VYKKIVDKTVAFLVLYVHDILLFGN----------------------------------------------------------ENSKKGLLPFRHGVHLS
Query: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
K+QCPKTPQDV+ MR IPYASA+GSLMYAMLCTRPDICYAVGIV+RYQSN GL HWT L Y + R + + IL D + SR
Subjt: KDQCPKTPQDVQNMRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTYGIQIRLFGPI-----RILGNPLGVDLHYEWRSR--
Query: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
VWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM PITL+CD G
Subjt: -------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPITLFCDKRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.1e-17 | 26.3 | Show/hide |
Query: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDK----TVAFLVLYVHDILLFGNE-----NSKKGLL-PFR---------------
VC+L+++IYGLKQA+R W F++A+K +F + C+Y I+DK +++LYV D+++ + N K+ L+ FR
Subjt: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDK----TVAFLVLYVHDILLFGNE-----NSKKGLL-PFR---------------
Query: ----HGVHLSKDQCPKTPQDVQNMR------------------------RIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTY-
++LS+ K NM P S IG LMY MLCTRPD+ AV I++RY S + + W L Y
Subjt: ----HGVHLSKDQCPKTPQDVQNMR------------------------RIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDLTY-
Query: --GIQIRL-FGPIRILGNPLGVDLHYEWRSR--------------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPI
I ++L F N + + +W W + +Q +A S+ EAEY+ EA +E +WL+ +T + + + PI
Subjt: --GIQIRL-FGPIRILGNPLGVDLHYEWRSR--------------------VWRSIKQGCIADSTMEAEYVVACEAAKEVVWLRKFMTDLEVVPNMILPI
Query: TLFCDKRG
++ D +G
Subjt: TLFCDKRG
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| P0CV72 Secreted RxLR effector protein 161 | 1.5e-11 | 32.84 | Show/hide |
Query: MRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDL-------TYGIQIRLFGPIRILGNPLGVDLHYEWRSR-------------
M+ +PY SA+G++MY M+ TRPD+ AVG+++++ S+ HW L TYG++ G +++G D + SR
Subjt: MRRIPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHWTTWGFDL-------TYGIQIRLFGPIRILGNPLGVDLHYEWRSR-------------
Query: --VWRSIKQGCIADSTMEAEYVVACEAAKEVVWL
WRS KQ +A S+ E EY+ EA +E VWL
Subjt: --VWRSIKQGCIADSTMEAEYVVACEAAKEVVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.9e-45 | 25.1 | Show/hide |
Query: FKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEI--------TPQ-----------------------------LSKTVETAVYILNNVPSKS
F+++ VE G+ LK LR D GGEY EF++Y H I TPQ + V+TA Y++N PS
Subjt: FKEYKTEVENLLGKSLKTLRLDRGGEYMDIEFQDYMIEHEI--------TPQ-----------------------------LSKTVETAVYILNNVPSKS
Query: VC-ETPFEVLSGCKSSLHHFRIWGCP--AHVLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLN------
+ E P V + + S H +++GC AHV KL+ +S C+F+GY E G +DP K +V S + F E VR S+ V N
Subjt: VC-ETPFEVLSGCKSSLHHFRIWGCP--AHVLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLN------
Query: -EMDSTSAKVVNGASTSTSVVDPSTS---------------SQIRSPELGMP-----RRSGRVVRQRDRYMGLAETSVIAPDDDCEDPLTYDQAMVDVGK
+ STS + ST+ V + ++ P G RRS R + RY T + DD +P + + + K
Subjt: -EMDSTSAKVVNGASTSTSVVDPSTS---------------SQIRSPELGMP-----RRSGRVVRQRDRYMGLAETSVIAPDDDCEDPLTYDQAMVDVGK
Query: DEWIKAI---------NGVYVL--------------QFCL---GAC------------------------------------------------------
++ +KA+ NG Y L F L G C
Subjt: DEWIKAI---------NGVYVL--------------QFCL---GAC------------------------------------------------------
Query: -------------------GSTGWGQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVY-KKIVDKTVAFLVLYVHDILLFGNE-----
G G++ VC+L++S+YGLKQA R W ++FD +KS + + PCVY K+ + L+LYV D+L+ G +
Subjt: -------------------GSTGWGQEQKVCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVY-KKIVDKTVAFLVLYVHDILLFGNE-----
Query: -----------------------------------------------------NSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAML
N+K P + LSK CP T ++ NM ++PY+SA+GSLMYAM+
Subjt: -----------------------------------------------------NSKKGLLPFRHGVHLSKDQCPKTPQDVQNMRRIPYASAIGSLMYAML
Query: CTRPDICYAVGIVNRYQSNSGLDHWT-----------TWGFDLTYG---------IQIRLFGPIRILGNPLGVDLHYEWRSRVWRSIKQGCIADSTMEAE
CTRPDI +AVG+V+R+ N G +HW T G L +G + G I + G + + W+S Q C+A ST EAE
Subjt: CTRPDICYAVGIVNRYQSNSGLDHWT-----------TWGFDLTYG---------IQIRLFGPIRILGNPLGVDLHYEWRSRVWRSIKQGCIADSTMEAE
Query: YVVACEAAKEVVWLRKFMTDL
Y+ A E KE++WL++F+ +L
Subjt: YVVACEAAKEVVWLRKFMTDL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-05 | 24.78 | Show/hide |
Query: ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDI--EFQDYMIEHEITPQ-------LSK-----TVET---------------------AVYILNNVPSKS
E F +K +EN + T D GGE++ + F + I H +P LS+ VET AVY++N +P+
Subjt: ERFKEYKTEVENLLGKSLKTLRLDRGGEYMDI--EFQDYMIEHEITPQ-------LSK-----TVET---------------------AVYILNNVPSKS
Query: V-CETPFEVLSGCKSSLHHFRIWGCPAHVLVS--NPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMDSTS
+ E+PF+ L G + R++GC + + N KL+ +S+ C+F+GY L + +R+ +S + F E + P S ++ +T
Subjt: V-CETPFEVLSGCKSSLHHFRIWGCPAHVLVS--NPKKLEPRSKLCLFVGYPKETRGGLFYDPKKNRVCVSTNATFLEEDHVRDHLPRSKFVLNEMDSTS
Query: AKVVNGASTSTSVVDPSTSSQIRSPELGMP
+ V S+ V P T+ R+P L P
Subjt: AKVVNGASTSTSVVDPSTSSQIRSPELGMP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-05 | 32.31 | Show/hide |
Query: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGNE
VC+L +++YGLKQA R+W + + + F +V ++ K++ ++++YV DIL+ GN+
Subjt: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGNE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-07 | 23.53 | Show/hide |
Query: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGNE----NSKKGLLPFRHGVHLSKD-------QCPKTP
VCRL ++IYGLKQA R+W + + + F ++ ++ +++ ++++YV DIL+ GN+ L R V +D + + P
Subjt: VCRLHRSIYGLKQASRSWNIRFDEAIKSYDFDQNVDGPCVYKKIVDKTVAFLVLYVHDILLFGNE----NSKKGLLPFRHGVHLSKD-------QCPKTP
Query: QDVQNMRR---------------------------------------IPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHW
Q + +R Y +GSL Y + TRPD+ YAV +++Y DHW
Subjt: QDVQNMRR---------------------------------------IPYASAIGSLMYAMLCTRPDICYAVGIVNRYQSNSGLDHW
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