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Tan0015173 (gene) of Snake gourd v1 genome

Gene IDTan0015173
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Genome locationContig00124:162345..162707
RNA-Seq ExpressionTan0015173
SyntenyTan0015173
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR023043 - NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHB75968.1 NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]8.0e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009004049.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix]6.1e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009751658.1 NADH dehydrogenase subunit C [Hodgsonia heteroclita]8.0e-5597.5Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISG+LAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009752164.1 NADH dehydrogenase subunit C [Linnaeosicyos amara]4.7e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAFRISGVLAPL KEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_010131099.1 NADH-plastoquinone oxidoreductase subunit 3 [Benincasa hispida]1.0e-5497.5Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEA+IF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

TrEMBL top hitse value%identityAlignment
A0A1P8LFN3 NADH-quinone oxidoreductase subunit A3.0e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A1X9Q1U8 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.0e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A218KG53 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.0e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A6H0ETI4 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.0e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A6H0EV73 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic2.3e-5598.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAFRISGVLAPL KEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

SwissProt top hitse value%identityAlignment
P52765 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.7e-5593.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFW FLIISS+IPILAF ISG+LAP+SK PEKLSSYESGIEPMGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q0ZJ15 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.7e-5594.17Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFW FLIISSVIPILAF ISGVLAP+SK PEKLSSYESGIEPMGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVG VYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q49KZ3 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic5.8e-5694.17Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFW FLIISSVIPILAF ISG+LAP+SK PEKLSSYESGIEPMGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q4VZH0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic8.1e-5898.33Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFWVFLIISSVIPILAF ISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q9M3L9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic2.9e-5592.5Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFW FLIISSVIPILAF  SG+LAP+SK PEKLSSYESGIEPMGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFD+LGVSVFIEALIF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein6.2e-1333.93Show/hide
Query:  EYEIFWVFLIISSVIPILAFRISGVLAPLSKE-PEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIL
        E+    ++L+IS ++ ++   +    A  S   PEKLS+YE G +P GDA  +F IR+Y+ +++F++ D+E  F +PWA+  + + +  F   + F+ IL
Subjt:  EYEIFWVFLIISSVIPILAFRISGVLAPLSKE-PEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIL

Query:  IVGLVYAWRKGA
         +G +Y W++GA
Subjt:  IVGLVYAWRKGA

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein1.2e-5387.5Show/hide
Query:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF
        MFLLYEY+IFW FL+ISS IP+LAF ISGVL+P+ K PEKLSSYESGIEP+GDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS FIEA IF
Subjt:  MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILI+GLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

ATMG00990.1 NADH dehydrogenase 31.1e-1233.04Show/hide
Query:  LLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKE-PEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFV
        ++ E+    ++L+IS ++ ++   +    A  S   PEKLS+YE G +P GDA  +F IR+Y+ +++F++ D+E  F +PWA+  + + +  F   + F+
Subjt:  LLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKE-PEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFV

Query:  LILIVGLVYAWRKGA
         IL +G +Y W++GA
Subjt:  LILIVGLVYAWRKGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGCTTTACGAATATGAGATTTTTTGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCGAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGA
GCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGGTACAATTTCGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATG
TTGAAACGGTTTTTCTTTATCCATGGGCAATGAGTTTTGATGTATTGGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTAT
GCATGGCGAAAAGGAGCATTGGAATGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTGCTTTACGAATATGAGATTTTTTGGGTATTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCGAATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGA
GCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGGTACAATTTCGAATCCGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATG
TTGAAACGGTTTTTCTTTATCCATGGGCAATGAGTTTTGATGTATTGGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTAT
GCATGGCGAAAAGGAGCATTGGAATGGTCTTAG
Protein sequenceShow/hide protein sequence
MFLLYEYEIFWVFLIISSVIPILAFRISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVY
AWRKGALEWS