; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015189 (gene) of Snake gourd v1 genome

Gene IDTan0015189
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF181 homolog
Genome locationLG03:75930772..75933812
RNA-Seq ExpressionTan0015189
SyntenyTan0015189
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603894.1 hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4676.92Show/hide
Query:  GIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEV
        GIKDA  CGDV +SCFM+RA EEGCETSAHPTL DAAMER+WCSVCLS VME + A++L CQHEFHKICVERWFHECQ QKTC IC FW+ +E+ Q TEV
Subjt:  GIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEV

Query:  LTEEMVIWFTSFHVIGY
        LTEEMVIW TS HVI Y
Subjt:  LTEEMVIWFTSFHVIGY

TXG59839.1 hypothetical protein EZV62_014412 [Acer yangbiense]1.0e-2147.52Show/hide
Query:  MVYRKIISSFYNFIVLRLFP-GIKDAFLCGDVYESCFMQRANEEGCETSAHP---TLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHEC
        MV+++++ S YNFI L   P G K A L  DV  S        EG   S  P    +DA  E + C VCLS++ +GE+ RVL C H+FHK+CV+ WF+ C
Subjt:  MVYRKIISSFYNFIVLRLFP-GIKDAFLCGDVYESCFMQRANEEGCETSAHP---TLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHEC

Query:  QKQKTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY
           KTCP+C F M EEE     E LTEEM+IWF+SFHV G+
Subjt:  QKQKTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY

XP_022132660.1 E3 ubiquitin-protein ligase RNF181 homolog [Momordica charantia]3.1e-5576.09Show/hide
Query:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLH--CQHEFHKICVERWFHECQK
        MVYRKIISSFYNF+VL+L+PGIKDA  CGDV ES   QRA +EGCE  AHPTL  A+ R+WCSVCLSKVMEGEE+RVL   C HEFHKIC++RWFHEC  
Subjt:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLH--CQHEFHKICVERWFHECQK

Query:  QKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVIGY
        QKTCPIC FW+R+++GQTTEVLTEEMVIWFTSFHV+GY
Subjt:  QKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVIGY

XP_022977421.1 uncharacterized protein LOC111477769 isoform X1 [Cucurbita maxima]8.0e-4372.27Show/hide
Query:  FPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTT
        FP  K  +  GDV +S FM+RA EEGCETSAHPTL DAA+ER+WCSVC S VME + A++L CQHEFHKICVERWFHECQ QKTCPIC FW+R+E+ Q T
Subjt:  FPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTT

Query:  EVLTEEMVIWFTSFHVIGY
        EVLTEEMVIW TS HVI Y
Subjt:  EVLTEEMVIWFTSFHVIGY

XP_038883680.1 E3 ubiquitin-protein ligase znrf3-like [Benincasa hispida]6.5e-5377.61Show/hide
Query:  VYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLD-AAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQK
        + +KIISS +NFI LR  PGIK+A LC D   SCFMQRA E+GCETS HPTLD AAME +WCSVCLSKVME EEARVL CQHE HKICVERWFH+CQKQK
Subjt:  VYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLD-AAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQK

Query:  TCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVI
        TCPIC FWMR+E+ QTTEVLTEEMVIWFT F VI
Subjt:  TCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVI

TrEMBL top hitse value%identityAlignment
A0A061DGH2 Nucleic acid binding protein, putative1.2e-2041.61Show/hide
Query:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQK
        MV  K+++  YN I +R+   IK+A     V +    ++  E      A P    A E + C VCLS + EG++ RVL C H+FH++CV+RW   C  +K
Subjt:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQK

Query:  TCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY
         CP+C F M EEE     E  TEEM+IWF+SFHV G+
Subjt:  TCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY

A0A5B6YSP6 Putative E3 ubiquitin-protein ligase RHA2A (Fragment)5.4e-2146.38Show/hide
Query:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVME-GEEARVLHCQHEFHKICVERWFHECQKQ
        MV +K++S   +FI LR    IKD+    +V ES    +  E   E         A+E + C VCLS++ E GE+ RVL C HEFH++CV+RWF+ C   
Subjt:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVME-GEEARVLHCQHEFHKICVERWFHECQKQ

Query:  KTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY
        KTCP+C F M +EE  Q  E LTEEMVIWF+SFH  G+
Subjt:  KTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY

A0A5C7HSR0 RING-type domain-containing protein4.9e-2247.52Show/hide
Query:  MVYRKIISSFYNFIVLRLFP-GIKDAFLCGDVYESCFMQRANEEGCETSAHP---TLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHEC
        MV+++++ S YNFI L   P G K A L  DV  S        EG   S  P    +DA  E + C VCLS++ +GE+ RVL C H+FHK+CV+ WF+ C
Subjt:  MVYRKIISSFYNFIVLRLFP-GIKDAFLCGDVYESCFMQRANEEGCETSAHP---TLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHEC

Query:  QKQKTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY
           KTCP+C F M EEE     E LTEEM+IWF+SFHV G+
Subjt:  QKQKTCPICCFWMREEEG-QTTEVLTEEMVIWFTSFHVIGY

A0A6J1BT35 E3 ubiquitin-protein ligase RNF181 homolog1.5e-5576.09Show/hide
Query:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLH--CQHEFHKICVERWFHECQK
        MVYRKIISSFYNF+VL+L+PGIKDA  CGDV ES   QRA +EGCE  AHPTL  A+ R+WCSVCLSKVMEGEE+RVL   C HEFHKIC++RWFHEC  
Subjt:  MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLH--CQHEFHKICVERWFHECQK

Query:  QKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVIGY
        QKTCPIC FW+R+++GQTTEVLTEEMVIWFTSFHV+GY
Subjt:  QKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFHVIGY

A0A6J1IJV3 uncharacterized protein LOC111477769 isoform X13.9e-4372.27Show/hide
Query:  FPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTT
        FP  K  +  GDV +S FM+RA EEGCETSAHPTL DAA+ER+WCSVC S VME + A++L CQHEFHKICVERWFHECQ QKTCPIC FW+R+E+ Q T
Subjt:  FPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTL-DAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTT

Query:  EVLTEEMVIWFTSFHVIGY
        EVLTEEMVIW TS HVI Y
Subjt:  EVLTEEMVIWFTSFHVIGY

SwissProt top hitse value%identityAlignment
Q5NCP0 E3 ubiquitin-protein ligase RNF431.1e-0745.65Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCF
        C++CL +  EG+E RV+ C HEFH+ CV+ W ++    +TCP+C F
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCF

Q68DV7 E3 ubiquitin-protein ligase RNF433.9e-0846Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMRE
        C++CL +  EG+E RV+ C HEFH+ CV+ W H+    +TCP+C F + E
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMRE

Q9NVW2 E3 ubiquitin-protein ligase RLIM1.6e-0647.83Show/hide
Query:  KWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC
        K CSVC+++  EG + R L C HE+H  C++RW  E     TCPIC
Subjt:  KWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC

Q9ULT6 E3 ubiquitin-protein ligase ZNRF37.3e-0739.34Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTE
        C++CL K ++GEE RV+ C H FH+ CV+ W     +  TCP C   + E++G  + V  E
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTE

Q9ZT50 E3 ubiquitin-protein ligase RHA2A5.1e-0859.09Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC
        C VCLSK+ EGEE R L C+H FHK C+E W H  Q   TCP+C
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A3.6e-0959.09Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC
        C VCLSK+ EGEE R L C+H FHK C+E W H  Q   TCP+C
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC

AT2G01150.1 RING-H2 finger protein 2B1.7e-0650Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC
        C VCLSK+  GEE R L C+H FHK C+E W         CP+C
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC

AT3G51325.1 RING/U-box superfamily protein1.0e-1141.33Show/hide
Query:  ERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFH
        E + CSVCL ++   +  + L C HEFH +CV+ WF+  +K   CP+C F        TT +LT+E+++WF+SFH
Subjt:  ERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTEEMVIWFTSFH

AT4G32600.1 RING/U-box superfamily protein1.7e-0635.38Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTEEMVI
        C +CL+K    EE R L C H FHK CV++W    +   +CP+C    + E G+    LT + ++
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMREEEGQTTEVLTEEMVI

AT5G45290.1 RING/U-box superfamily protein2.2e-0643.18Show/hide
Query:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC
        C +CL +  E +  R L C HEFHK CV++W  E    + CP+C
Subjt:  CSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACAGGAAGATAATCTCCTCCTTTTATAACTTTATTGTCCTCAGATTGTTTCCAGGAATCAAGGACGCATTTTTATGTGGAGATGTTTATGAATCATGTTTTAT
GCAGAGGGCCAATGAGGAAGGTTGTGAGACTTCAGCACATCCAACCTTGGATGCTGCTATGGAGAGGAAGTGGTGTTCTGTGTGTTTATCAAAAGTAATGGAGGGAGAGG
AAGCGCGAGTTCTTCATTGCCAACACGAGTTTCACAAGATATGCGTCGAGAGGTGGTTCCATGAATGCCAGAAACAGAAAACTTGTCCAATTTGTTGCTTCTGGATGAGA
GAAGAAGAAGGTCAAACAACAGAAGTTCTTACGGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTACTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGTCATCCTTAAAAAAATGTGTTAATGAAATAAATGGAAAAAAAATAAAATAAAACATGTTAATTTCTTATTAATTAGTTTATTAAAAAAGCAATTAACGAAAAAAG
TTAATAAAACCCTCAATATTTGCATGTCTCCGTCCTTAAAACCCTGCGGTGAATTTAAACCTTTCGAAGCAAAAATTCAGACCGCGAAAAATTGAATCGAAACTCATCTT
TCTTCGAAGTCCAAAGTAAAATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCCGAGATCCTGGTCTGCCCGCTCTCCAAA
CAACCTCTAAGGTATTGCGAGGCGTCGAATTCTCTGATCAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTACATAAAGAGAATGTTTCGGCTTGAATTCTGTAAAAAA
TTGCATTCCACTATAATTCTTCATCCATGACCATTTCTGTTTTCATTTTGATTTTCCTTTTCCATATTAGCTCTCTGGTTCATGATGTTAGATCGTCAAGAGTGCGTCGC
TGTTATCTGACTTGCTTAAGTAGCGAACGGTTACATTAACTTTGAGTCATATTATGGTATACCTAGTGATGGATCAAGACACTCCTTGGCTACATTAGTTTAATGAAATA
TTTCTCAATTTTGCTAGATTAGGTAGTAAAAATGACTGTAGGAACCAGAATGCAGTGTTGAAACCCTTGGTTTTCTTCTTCTCTTTTCCCCCCTTCATTTGTGGGAGGTT
AGGCTACAAGACATGTGCCTGTTTCTATTTTATGTTGTAATTCATCCGATTTACTTATGGTTGTGTTAGATAAAGGGTGGAATTCCTTGCTTGGTGCCAAAGGATGGAAG
GATAATCGAAACTGATGACGCATTGAAAGGGGCAAGGTGACTTGCGTTTCCTTTCATGAGACGCTGGCATTTCTCAGACAATTTTCCTTCATAAAATGGTTATGATTCCA
TCAAGTTAGGAGGTGTGCAGTGTTGTTTATAACGATGTGACAGGCACAGCAGATGAGGTAGTAGTTTTATTTACATTTGGCATTGGACATTATAACATGAAAGGTCAAGA
GTAGTAATCCTGTTTAGGTGCAACCACTTTGTGTTTGAAATTTGGGGATCTTCTTCTTCAATCTAACTTCCCTTCCTCAAACAAAACTATCTCCCATTAAAGAACTATAA
CCCAATATCCTTCTTACCTTTAACCGGATGGTTTACAGGAAGATAATCTCCTCCTTTTATAACTTTATTGTCCTCAGATTGTTTCCAGGAATCAAGGACGCATTTTTATG
TGGAGATGTTTATGAATCATGTTTTATGCAGAGGGCCAATGAGGAAGGTTGTGAGACTTCAGCACATCCAACCTTGGATGCTGCTATGGAGAGGAAGTGGTGTTCTGTGT
GTTTATCAAAAGTAATGGAGGGAGAGGAAGCGCGAGTTCTTCATTGCCAACACGAGTTTCACAAGATATGCGTCGAGAGGTGGTTCCATGAATGCCAGAAACAGAAAACT
TGTCCAATTTGTTGCTTCTGGATGAGAGAAGAAGAAGGTCAAACAACAGAAGTTCTTACGGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTACTAAAC
TGAACTGAAAGTTCTCGTCTGTTTCTTTGTGGTAACTAGCAAACCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATAATGGTTTATATTCG
ACAAAGTAACCAGATAAGGTTCTTTGGTATTGAATATCTCTACAAAACAGAGATTTGCAGATAACAGTCATCCCTACGAATACCAGATTGTACTTAAGTTGGTAAACAAT
TAAAATGTAGAGCTGCAATCTTTCTTAGACGTAATTTTGAAAGCAATGTAGTTGCGAATATTTCTTGACTTTGGAC
Protein sequenceShow/hide protein sequence
MVYRKIISSFYNFIVLRLFPGIKDAFLCGDVYESCFMQRANEEGCETSAHPTLDAAMERKWCSVCLSKVMEGEEARVLHCQHEFHKICVERWFHECQKQKTCPICCFWMR
EEEGQTTEVLTEEMVIWFTSFHVIGY