; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015198 (gene) of Snake gourd v1 genome

Gene IDTan0015198
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationLG04:4406819..4409286
RNA-Seq ExpressionTan0015198
SyntenyTan0015198
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]3.5e-13983.02Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQ
        S AAA A     ASTSNATTPRSFETTS+HQ                DASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQ
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQ

Query:  GVDDKNGFPSLSHLHLESGNHHRE
        G DDKN FPS+SHLHL+SGNHHRE
Subjt:  GVDDKNGFPSLSHLHLESGNHHRE

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]1.3e-14187.01Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL
        S AAA A     ASTSNATTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL

Query:  ESGNHHRE
        +SGNHHRE
Subjt:  ESGNHHRE

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]2.6e-14287.34Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL
        S AAA A     ASTSNATTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL

Query:  ESGNHHRE
        +SGNHHRE
Subjt:  ESGNHHRE

XP_022138928.1 protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]9.8e-14288.24Show/hide
Query:  MLGLRDVLFIASTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL--PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG
        MLGLRDVLFIA TPSSLHQQ TQI+SSDHHPSLPLPSSAALGVSVGIFPLLAATPCL  PPPP   A EV++R R ++NLKRTQDFGFGKGDSLI GG  
Subjt:  MLGLRDVLFIASTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL--PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG

Query:  S-DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQST
        + DE V+GDAGDSSM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQST
Subjt:  S-DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQST

Query:  AAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLES
        AAA AA+ASHASTSNATTPRSFET+SNHQDASFKKSLPGQVRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG+DDKNGFPS+SHLHLES
Subjt:  AAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLES

Query:  GNHHRE
        GNHH +
Subjt:  GNHHRE

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]1.3e-14689.9Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPP---PNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSSAALGVSVGIFPLL ATPCLPPP   PNQTA++VTDRSRSLENLKRTQDFGFGKGDSL+GG G 
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPP---PNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG

Query:  --SDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQS
          SDEQVKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQS
Subjt:  --SDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQS

Query:  TAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLE
        TAAA A     ASTSNATTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL+
Subjt:  TAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLE

Query:  SGNHHRE
        SGNHHR+
Subjt:  SGNHHRE

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein6.2e-14287.01Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL
        S AAA A     ASTSNATTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL

Query:  ESGNHHRE
        +SGNHHRE
Subjt:  ESGNHHRE

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 11.2e-14287.34Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL
        S AAA A     ASTSNATTPRSFETTS+HQDASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHL

Query:  ESGNHHRE
        +SGNHHRE
Subjt:  ESGNHHRE

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 11.7e-13983.02Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG
        MLGLRDVLFIA TPSSLHQQTQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL    PPP N T ++VTDR+R+ +NLKRTQDFGFGKG+SLIGG G
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL----PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG

Query:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ
          GSDE VKGDAGD SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQ
Subjt:  --GSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQ

Query:  STAAATAAAASHASTSNATTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQ
        S AAA A     ASTSNATTPRSFETTS+HQ                DASFKKSLPG VRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQ
Subjt:  STAAATAAAASHASTSNATTPRSFETTSNHQ----------------DASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQ

Query:  GVDDKNGFPSLSHLHLESGNHHRE
        G DDKN FPS+SHLHL+SGNHHRE
Subjt:  GVDDKNGFPSLSHLHLESGNHHRE

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 14.7e-14288.24Show/hide
Query:  MLGLRDVLFIASTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL--PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG
        MLGLRDVLFIA TPSSLHQQ TQI+SSDHHPSLPLPSSAALGVSVGIFPLLAATPCL  PPPP   A EV++R R ++NLKRTQDFGFGKGDSLI GG  
Subjt:  MLGLRDVLFIASTPSSLHQQ-TQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCL--PPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGG

Query:  S-DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQST
        + DE V+GDAGDSSM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVATAS DGGSSGSSSAGAKRPRVLIPSQST
Subjt:  S-DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQST

Query:  AAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLES
        AAA AA+ASHASTSNATTPRSFET+SNHQDASFKKSLPGQVRAPAVFRCHRVTAI S EGELAYQATVNIGGHVFKGFLYDQG+DDKNGFPS+SHLHLES
Subjt:  AAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLES

Query:  GNHHRE
        GNHH +
Subjt:  GNHHRE

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like2.7e-13785.53Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG--GS
        MLGLRDVLFIA TPSSLHQ TQI+SSDHHPSLPLPSS ALGVSVGIFPLLAATPCL PPPNQ  +E++DRSRSLENLKRTQDFGFGKGDSLIGGGG  G 
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGG--GS

Query:  DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAA
        D+QVKGD GD S+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ+TAA
Subjt:  DEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAA

Query:  ATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLESGN
        A A     ASTSNATTPRSFETTS+HQDASFKKSLPGQV+APAVF+CHRVTAI S EGEL YQATVNIGGHVFKGFLYDQG D KN  PS+SHLHLESGN
Subjt:  ATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLESGN

Query:  HHRE
        H R+
Subjt:  HHRE

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 21.5e-2844.69Show/hide
Query:  DAGDSSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATA
        D   SS ++   CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P +RRRERQ  + M      S  GG  GS S GA      IP +       
Subjt:  DAGDSSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATA

Query:  AAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-GSVEGELAYQATVNIGGHVFKGFLYDQG
               TS+++   S        +ASF    PG+V + A+FRC +++ +    +G+ AYQ TVNIGGH+FKG LYDQG
Subjt:  AAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAI-GSVEGELAYQATVNIGGHVFKGFLYDQG

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 19.4e-5547.57Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A       P Q  E+          R ++  N   TQ   F K  +   
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG

Query:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS
         G  S+    G +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL
        Q        A SH STSN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+   + E AYQA V IGGHVFKGFLYDQG++ K GFPS+S L
Subjt:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL

Query:  HL-ESGNHH
        HL  S N+H
Subjt:  HL-ESGNHH

Q9M2U4 Protein SHI RELATED SEQUENCE 61.6e-3043.58Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNA
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNA

Query:  TTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVE-GELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLS
               TT++ Q+  F++ LPG++ APAVF+  RVTAI + E  E+ YQATV I GH+FKGFL+  GVD    FP LS
Subjt:  TTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVE-GELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLS

Q9SD40 Protein SHI RELATED SEQUENCE 16.4e-2740.66Show/hide
Query:  GDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAA
        G  G S    C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPA++RRERQ  +      T    G S        KR R  +P+ S++      
Subjt:  GDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAA

Query:  ASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNG
         SH+                        + P +V + AVFRC RV+++   E E AYQ  V+IGGH+FKG LYD G     G
Subjt:  ASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNG

Q9XGX0 Protein SHORT INTERNODES3.2e-2640.87Show/hide
Query:  TQDFGFGKGD---SLIGGGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGS
        T   G G G    SLI   GG+   ++  +G    + C+DCGN++KK+C + RCRTCCK RG  C THVKSTWVPA++RRERQ       ++T       
Subjt:  TQDFGFGKGD---SLIGGGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGS

Query:  SGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLY
         GS     KR R  IP++ST+ A     S+              TS  +  +F    P +V + AVFRC RV+++   E E AY+  V+IGGHVFKG LY
Subjt:  SGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLY

Query:  DQGVDDKN
        DQG  +++
Subjt:  DQGVDDKN

Arabidopsis top hitse value%identityAlignment
AT3G54430.1 SHI-related sequence 61.1e-3143.58Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNA
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNA

Query:  TTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVE-GELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLS
               TT++ Q+  F++ LPG++ APAVF+  RVTAI + E  E+ YQATV I GH+FKGFL+  GVD    FP LS
Subjt:  TTPRSFETTSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVE-GELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLS

AT5G12330.1 Lateral root primordium (LRP) protein-related6.7e-5647.57Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A       P Q  E+          R ++  N   TQ   F K  +   
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG

Query:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS
         G  S+    G +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL
        Q        A SH STSN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+   + E AYQA V IGGHVFKGFLYDQG++ K GFPS+S L
Subjt:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL

Query:  HL-ESGNHH
        HL  S N+H
Subjt:  HL-ESGNHH

AT5G12330.2 Lateral root primordium (LRP) protein-related6.7e-5647.57Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A       P Q  E+          R ++  N   TQ   F K  +   
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG

Query:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS
         G  S+    G +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL
        Q        A SH STSN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+   + E AYQA V IGGHVFKGFLYDQG++ K GFPS+S L
Subjt:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL

Query:  HL-ESGNHH
        HL  S N+H
Subjt:  HL-ESGNHH

AT5G12330.3 Lateral root primordium (LRP) protein-related4.8e-3043.33Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A       P Q  E+          R ++  N   TQ   F K  +   
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG

Query:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS
         G  S+    G +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSL
        Q        A SH STSN T P+SFET+S+ Q  SF  SL
Subjt:  QSTAAATAAAASHASTSNATTPRSFETTSNHQDASFKKSL

AT5G12330.4 Lateral root primordium (LRP) protein-related6.7e-5647.57Show/hide
Query:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG
        M+GLRDV  +A  P+  HQ   ++S   H +    ++AALG  VG+ PLL A       P Q  E+          R ++  N   TQ   F K  +   
Subjt:  MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEV-------TDRSRSLENLKRTQDFGFGKGDSLIG

Query:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS
         G  S+    G +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  GGGGSDEQVKGDAGDSSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPS

Query:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL
        Q        A SH STSN T P+SFET+S+ QD    +++ PGQVRA AVF+C RVTA+   + E AYQA V IGGHVFKGFLYDQG++ K GFPS+S L
Subjt:  QSTAAATAAAASHASTSNATTPRSFETTSNHQD-ASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHL

Query:  HL-ESGNHH
        HL  S N+H
Subjt:  HL-ESGNHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCTCAGAGATGTTCTGTTTATAGCTTCGACGCCTTCTTCTCTTCACCAACAAACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTACCCTCCTC
CGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCTCTTTTGGCCGCAACCCCATGTCTCCCGCCGCCGCCCAATCAGACCGCCGAGGAAGTTACCGATCGTAGTCGGAGTT
TGGAGAATCTGAAGAGAACTCAGGATTTTGGATTTGGGAAAGGGGATTCGTTAATCGGCGGCGGTGGAGGCTCCGACGAGCAGGTGAAAGGCGACGCCGGCGATAGTTCC
ATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTACTCACGTGAAGAG
CACGTGGGTGCCGGCGTCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGCCGACGGTGGTTCTTCTGGTTCTTCCTCTGCTGGTG
CCAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTACAGCTGCCGCCACTGCCGCCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACCCCCCGGAGCTTTGAAACA
ACCTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCACCAGCCGTGTTCCGGTGCCATAGAGTGACAGCCATTGGCAGTGTTGAAGGGGA
GTTGGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGTTGATGACAAAAATGGATTCCCATCTCTTTCACACCTCCATT
TGGAAAGTGGTAACCATCACAGGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATAGCCATATGTTTATTGTTATTCCCTTCCTCTGAAGGTAAAACAACTTTGTCACTGCAGAGTTTGAAGAATCATTCATTCCAACTCCAACTCCATCTTCTTCTTCTTCA
TTTCTCTCTCTTTCTTCTCTGTTACTGTGAATCTAGAGAGAGAATTCCACTCCATGAACACACCAACACAGTTCCAATTGCTTTTTGTTTAAGAAATTTTTTCTCATTTC
TCACCATTCACCCACACTGCAAAATTCCCACCCCTCCAAAGAACGAGCTCCGATTTCATCATTTAAATACTGTTCTGCCCCCCTTCTTAACCAAAATCAGAAACACCCTC
TTTCAATTTGTTTCAATCAATCGTCTTCTTCACGGAGTTTTTCAATCGACAGAGTAATGTTGGGTCTCAGAGATGTTCTGTTTATAGCTTCGACGCCTTCTTCTCTTCAC
CAACAAACCCAAATCCTTTCTTCCGATCATCACCCATCTCTTCCTCTACCCTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTTCCTCTTTTGGCCGCAACCCCATG
TCTCCCGCCGCCGCCCAATCAGACCGCCGAGGAAGTTACCGATCGTAGTCGGAGTTTGGAGAATCTGAAGAGAACTCAGGATTTTGGATTTGGGAAAGGGGATTCGTTAA
TCGGCGGCGGTGGAGGCTCCGACGAGCAGGTGAAAGGCGACGCCGGCGATAGTTCCATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGG
AGGTGCAGGACTTGTTGTAAGGGACGTGGGAATCATTGCTCTACTCACGTGAAGAGCACGTGGGTGCCGGCGTCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGA
CGGCGTCGCCACTGCTAGTGCCGACGGTGGTTCTTCTGGTTCTTCCTCTGCTGGTGCCAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTACAGCTGCCGCCACTGCCG
CCGCCGCCTCTCACGCTTCCACCTCCAATGCCACCACCCCCCGGAGCTTTGAAACAACCTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGG
GCACCAGCCGTGTTCCGGTGCCATAGAGTGACAGCCATTGGCAGTGTTGAAGGGGAGTTGGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCT
CTATGATCAAGGAGTTGATGACAAAAATGGATTCCCATCTCTTTCACACCTCCATTTGGAAAGTGGTAACCATCACAGGGAATAGAGACATTCCTCCTCTTCTTTCTTCT
CCAATTCTCCCTCCTGAGGATTACCCGAAAACTCGGTCTCGACCCCTTGAAAAATATCATATCACTACTAGGATTCAGTGATCTGCTATGTTATCTATAAGTTCTACATA
GTTACTTTCATGGTAGTACTGCAATCATATGCACTAAATAGAACCCAAAATCTTCTATTCTATAGTTTTTTAGCCTTAAAAGCTGGGGTTAGTGTAAAATTTCTCAAGTC
CAATGATAGTTGGATACTGATCTTCTGTATATTGCTAAGAAGATGTATAACTTTCATCTATCCAAACTTCATTAAACATCTGCTGAAGCAAGCTATCTTGTATTATATGT
TGGGAAACAAGAGTTCAGTCTCTTGGGTTTTGATTGTCTAGCTCGTAAAGTTCTACCGAAACGAATGTAATCGTTGGTGTTAGACCGATAGAGCATCGAGAGCATCTTCT
TTGTGAATGCCACCATGGTGGGATAGACAAAAAGTATGCAATGTTCCTTGCTTCTACATTACCATCTTTTACCTACAACTTGGAATATTTTCACTGATTTGAATCTTTTC
TAATTCTGAGAGGGA
Protein sequenceShow/hide protein sequence
MLGLRDVLFIASTPSSLHQQTQILSSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPPNQTAEEVTDRSRSLENLKRTQDFGFGKGDSLIGGGGGSDEQVKGDAGDSS
MAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASADGGSSGSSSAGAKRPRVLIPSQSTAAATAAAASHASTSNATTPRSFET
TSNHQDASFKKSLPGQVRAPAVFRCHRVTAIGSVEGELAYQATVNIGGHVFKGFLYDQGVDDKNGFPSLSHLHLESGNHHRE