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Tan0015200 (gene) of Snake gourd v1 genome

Gene IDTan0015200
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionconserved peptide upstream open reading frame 9
Genome locationLG11:3135033..3137807
RNA-Seq ExpressionTan0015200
SyntenyTan0015200
Gene Ontology termsNA
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8529244.1 hypothetical protein F0562_033957 [Nyssa sinensis]1.1e-1483.02Show/hide
Query:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        LMESKGGKK SSS SK +FYEAPLGY IEDVRP G IKKF+SAAY NCARKPS
Subjt:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

KAF0933604.1 hypothetical protein E2562_018846 [Oryza meyeriana var. granulata]1.1e-1471.88Show/hide
Query:  RAQGAGIANEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        R  GAG   +VLMESKGGKKKSSS    + YEAPLGY IED+RP G IKKF+SAAY NCARKPS
Subjt:  RAQGAGIANEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

KAF2541613.1 hypothetical protein F2Q68_00033297 [Brassica cretica]2.4e-1475Show/hide
Query:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        NE++MESKGGKKKSSS S   FYEAPLGY IEDVRP G IKKFKS+ Y NCA++PS
Subjt:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

KAG5416628.1 hypothetical protein IGI04_004195 [Brassica rapa subsp. trilocularis]1.1e-1475Show/hide
Query:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        NE++MESKGGKKKSSS S  +FYEAPLGY IEDVRP G IKKFKS+ Y NCA++PS
Subjt:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

XP_017427391.1 PREDICTED: uncharacterized protein LOC108335764 [Vigna angularis]1.1e-1482.69Show/hide
Query:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        MESKGGKKKSSS SK +FYEAPLGY IED+RP G IKKF+SAAY NCARKPS
Subjt:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

TrEMBL top hitse value%identityAlignment
A0A2G2X9F8 Uncharacterized protein2.0e-1480.77Show/hide
Query:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        MESKGGKKKSSS S  +FYEAPLGY IEDVRP G +KKF+SAAY NCARKPS
Subjt:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

A0A5J5AG46 Uncharacterized protein5.2e-1583.02Show/hide
Query:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        LMESKGGKK SSS SK +FYEAPLGY IEDVRP G IKKF+SAAY NCARKPS
Subjt:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

A0A5J5AL23 Uncharacterized protein2.0e-1484.91Show/hide
Query:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        LMESKGGKKKSSS SK +FYEAPLGY IEDVRP G IKKF+SAAY NCARKPS
Subjt:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

A0A6G1F9R9 Uncharacterized protein5.2e-1571.88Show/hide
Query:  RAQGAGIANEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        R  GAG   +VLMESKGGKKKSSS    + YEAPLGY IED+RP G IKKF+SAAY NCARKPS
Subjt:  RAQGAGIANEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

Q1KUN3 Uncharacterized protein1.5e-1478.57Show/hide
Query:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        NE +MESKGGKKKSSS SK +FYEAPLGY IEDVRP G IKKF+SAAY NCA++PS
Subjt:  NEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 94.6e-1675.47Show/hide
Query:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        +MESKGGKKKSSS S L FYEAPLGY IEDVRP G IKKFKS+ Y NC+++PS
Subjt:  LMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

AT3G25572.1 conserved peptide upstream open reading frame 113.1e-1266.67Show/hide
Query:  MESKGGKKKSSSISK--LMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        ME+KGGKKKSS+ S    +F+EAPL Y IEDVRP G IKKF+SAAY N   KPS
Subjt:  MESKGGKKKSSSISK--LMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

AT5G15948.1 conserved peptide upstream open reading frame 101.3e-1373.08Show/hide
Query:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS
        MESK G KKSSS S L  YEAPLGY IEDVRP G IKKFKS+ Y NCA++PS
Subjt:  MESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKSAAYYNCARKPS

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein5.1e-0751.67Show/hide
Query:  SSQKASYREGEAKGQTQVISNDMIKSCDVNMIDKASDAAQSTKESVEEAGQQMKARAQGA
        +SQ  S++ G+AKGQTQ  ++         M+DKAS+AAQS KES++E GQQ+K +AQGA
Subjt:  SSQKASYREGEAKGQTQVISNDMIKSCDVNMIDKASDAAQSTKESVEEAGQQMKARAQGA

AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein2.1e-0847.37Show/hide
Query:  DSSQKASYREGEAKGQTQVISNDMIKSCDVNMIDKASDAAQSTKESVEEAGQQMKARAQGAGIANEVLMESKGGKK
        ++SQ  S+  G+AKGQTQ  ++        N+IDKAS+AAQS KES++E GQQ+K +AQG   A+E + E  G  K
Subjt:  DSSQKASYREGEAKGQTQVISNDMIKSCDVNMIDKASDAAQSTKESVEEAGQQMKARAQGAGIANEVLMESKGGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCTCCCAAAAGGCCAGCTACCGCGAAGGAGAAGCTAAGGGTCAAACACAGGTGATCAGTAATGATATGATTAAATCATGTGATGTTAATATGATAGACAAGGC
AAGCGATGCAGCCCAATCAACTAAGGAATCGGTGGAAGAAGCAGGACAACAAATGAAAGCTAGAGCACAAGGGGCAGGAATAGCGAATGAAGTACTGATGGAATCTAAGG
GTGGTAAGAAAAAGTCTAGTAGTATTAGTAAATTGATGTTCTACGAAGCTCCCCTTGGTTACATCATTGAAGACGTCCGACCTCGTGGTGATATTAAGAAGTTCAAATCT
GCTGCTTACTACAACTGTGCTCGCAAGCCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCTCCCAAAAGGCCAGCTACCGCGAAGGAGAAGCTAAGGGTCAAACACAGGTGATCAGTAATGATATGATTAAATCATGTGATGTTAATATGATAGACAAGGC
AAGCGATGCAGCCCAATCAACTAAGGAATCGGTGGAAGAAGCAGGACAACAAATGAAAGCTAGAGCACAAGGGGCAGGAATAGCGAATGAAGTACTGATGGAATCTAAGG
GTGGTAAGAAAAAGTCTAGTAGTATTAGTAAATTGATGTTCTACGAAGCTCCCCTTGGTTACATCATTGAAGACGTCCGACCTCGTGGTGATATTAAGAAGTTCAAATCT
GCTGCTTACTACAACTGTGCTCGCAAGCCATCTTGA
Protein sequenceShow/hide protein sequence
MDSSQKASYREGEAKGQTQVISNDMIKSCDVNMIDKASDAAQSTKESVEEAGQQMKARAQGAGIANEVLMESKGGKKKSSSISKLMFYEAPLGYIIEDVRPRGDIKKFKS
AAYYNCARKPS