; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015206 (gene) of Snake gourd v1 genome

Gene IDTan0015206
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationLG06:68965565..68967318
RNA-Seq ExpressionTan0015206
SyntenyTan0015206
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-6856.8Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLV+LQ+ +PL DATS L QI+K+AD+ FT   L ++ASH SPRFVA LQM+ + FT YSVD  + S+VSLESFHDAMLDGG S SSM+IH+L++  Q+
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAP-KHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIR
        ILR+E P  + P +  EL L P Q   + +++YGKFF+++S+ LR++IKE PLF +D V V AT ++VKFSIASKEI   +E+G C I G+EGEDET++ 
Subjt:  ILRFEAP-KHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIR

Query:  IVLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM
        I   PMMFFL  TY   RV+FYKT  NS  V+  PAFG+Y QYV+YFP++
Subjt:  IVLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM

XP_022964072.1 uncharacterized protein LOC111464209 [Cucurbita moschata]4.5e-6863.76Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVR++   PL D TSRLAQIA+E+DIIFTPLSL +  S  SPRF+A LQ+ HQCFT YSV+ DH SR+SLES HDA+LD G SSSSMTIHLL+  N +
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
         LRFE P H PQ+RH++ LLP QE  IEEI+Y K  ++D R LR+VIKE PLF  DSVCVT T S+V+FSIAS+E+IF +E G CEI G +G+  ++ RI
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRV
        VLYPM+FFL LTYDV  V
Subjt:  VLYPMMFFLILTYDVYRV

XP_023000630.1 uncharacterized protein LOC111494874 [Cucurbita maxima]5.9e-8465.06Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVRL+   PL D TSRLAQIA+E+DIIFTPLSL++  S  SPRF+A LQ+ HQCFT YSV+ DHCSR+SLES HDA+LD G SSS+MTIHLL+  N +
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
        +LRFE P H PQ+RH+  LLP QE  IEEI+Y K  ++DSR LR+VIKE PLF  DSVCVT T S+V+FSIAS+E+IF +E G CEI G +G+  T+ RI
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM
        VLYPM+FFL LTYDV  V+F+KT  N+H VMIFP F ++AQYVIYFP+M
Subjt:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM

XP_023514484.1 uncharacterized protein LOC111778743 [Cucurbita pepo subsp. pepo]4.1e-6964.22Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVR++   PL D TSRLAQI +E+DIIFTPLSL +  S  SPRF+A LQ+ HQCFT YSV+ DH SR+SLES HDA+LD G SSSSMTIHLL+  N +
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
        +LRFE P H PQ+RH++ LLP QE  IEEI+Y K  ++DSR LR+VIKE PLF  DSVCVT T S+V+FSIAS+E+IF +E G CEI G +G+  T+ RI
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRV
        VLYPM+FFL LTYDV  V
Subjt:  VLYPMMFFLILTYDVYRV

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]3.1e-7763.16Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVRL+  +P   ATSRLA IA+EAD+ FTPL   I  S++ PRFVA L M + CF  Y VD DH SR+SLESFHDA+LDGG  S SMTIHLL  INQ+
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
        ILRFE+  H PQVRHEL+L PSQE D+ EIDY KFFSIDS+ LRRVI+  P+F  DS+CVTAT SQVKFSIASKEI+  +E   C I G+EGE+ET++ I
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFP
         L PM+FFL  T+D  RV+FYKT    HG M+ P+FG Y+QYVI FP
Subjt:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980101.6e-6360.28Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVRL++ +PL DATS LAQ+AK+AD+ FTPL L I+ S+RSP+FVA LQ++ + FT +SVD +  S+VSL+ FHDAMLDGG S SSMTIHLL T NQ+
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKH-LPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIR
        +LRFE P H +P + HEL L P Q  ++ +++YG FF++ SR LRR+IKE PLF +D+V VT T SQVKFSI SKEII  +E G C+I G+EGE ET+++
Subjt:  ILRFEAPKH-LPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIR

Query:  IVLYPMMFFLILTY
        +VL PMMFFL  TY
Subjt:  IVLYPMMFFLILTY

A0A1S3CL88 uncharacterized protein LOC1035022505.4e-6757.87Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIA-KEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQ
        MFLV+L+  DPL DATS LAQI+   AD+ FTP    I+ASHRSPRF+A LQ++ Q FTT+SVD DH S+VSLESFHDA+LDGG S +SMTIHLL   NQ
Subjt:  MFLVRLQRLDPLADATSRLAQIA-KEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQ

Query:  IILRFEAP-KHLPQVRHELTLLPSQEADIE----EIDYGKFFSIDSRGLRRVIKEFPLFLEDS-VCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGE
        +ILRF+ P   +  + HELTL P Q  D +    E+D  K+F + S+ LRR+IK+ P+F  DS + V  T+S+VKFSIASKEII + E   C+IEGFE E
Subjt:  IILRFEAP-KHLPQVRHELTLLPSQEADIE----EIDYGKFFSIDSRGLRRVIKEFPLFLEDS-VCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGE

Query:  DETQIRIVLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFP
         ETQ +I+L PMMFFL  TY   RV+FYKTK N++ +M+ PA+G++ QYVIYFP
Subjt:  DETQIRIVLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFP

A0A1S4E4N8 uncharacterized protein LOC1035022631.4e-6264.22Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVRL+  DPL DATSRLAQIA+EADI FTPL   I+AS+RSPRFVA LQM H CF  Y VD DH SR+SLESFHDA+LDGG +S SMTIHLL  I Q+
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETG----GCEIEGFEGEDET
        ILRFE+  H P+V HEL+L PSQE D+ E+DY KFFSIDS+ LRRVI+  P+F  DS+CVTAT SQVKFSIASKEI+  +E         IEG   E+E 
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETG----GCEIEGFEGEDET

Query:  QIRI
         + +
Subjt:  QIRI

A0A6J1HGU2 uncharacterized protein LOC1114642092.2e-6863.76Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVR++   PL D TSRLAQIA+E+DIIFTPLSL +  S  SPRF+A LQ+ HQCFT YSV+ DH SR+SLES HDA+LD G SSSSMTIHLL+  N +
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
         LRFE P H PQ+RH++ LLP QE  IEEI+Y K  ++D R LR+VIKE PLF  DSVCVT T S+V+FSIAS+E+IF +E G CEI G +G+  ++ RI
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRV
        VLYPM+FFL LTYDV  V
Subjt:  VLYPMMFFLILTYDVYRV

A0A6J1KIW5 uncharacterized protein LOC1114948742.8e-8465.06Show/hide
Query:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI
        MFLVRL+   PL D TSRLAQIA+E+DIIFTPLSL++  S  SPRF+A LQ+ HQCFT YSV+ DHCSR+SLES HDA+LD G SSS+MTIHLL+  N +
Subjt:  MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQI

Query:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI
        +LRFE P H PQ+RH+  LLP QE  IEEI+Y K  ++DSR LR+VIKE PLF  DSVCVT T S+V+FSIAS+E+IF +E G CEI G +G+  T+ RI
Subjt:  ILRFEAPKHLPQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRI

Query:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM
        VLYPM+FFL LTYDV  V+F+KT  N+H VMIFP F ++AQYVIYFP+M
Subjt:  VLYPMMFFLILTYDVYRVYFYKTKMNSHGVMIFPAFGLYAQYVIYFPQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGAGGCTTCAACGCTTAGATCCTCTTGCAGACGCAACCTCCCGACTCGCCCAAATTGCTAAGGAAGCCGATATTATATTCACACCTTTATCACTCCGGAT
CGTCGCCTCGCACCGTTCCCCTCGCTTCGTCGCCGCACTGCAAATGGCGCACCAATGCTTCACCACCTATTCCGTCGATGGCGATCACTGTTCCAGAGTTTCCCTCGAAT
CCTTCCACGATGCTATGTTAGACGGCGGAACTTCCTCTTCTTCCATGACCATCCATCTTCTTCAAACCATCAATCAAATCATCCTTCGTTTCGAGGCTCCAAAGCATCTC
CCACAAGTGCGTCACGAATTGACACTGTTACCTTCCCAAGAAGCGGATATAGAAGAAATTGATTATGGCAAGTTTTTTTCGATCGACTCACGAGGTTTAAGACGCGTTAT
AAAAGAATTCCCTCTCTTTCTAGAGGATTCAGTTTGTGTTACTGCAACCGATTCGCAAGTCAAATTCTCTATTGCCTCTAAAGAGATTATTTTTATTAGAGAGACTGGAG
GATGTGAAATTGAAGGTTTTGAAGGAGAAGATGAAACTCAAATCCGAATCGTTCTCTATCCCATGATGTTTTTTCTTATTTTGACATATGATGTATATAGGGTTTATTTT
TATAAGACAAAAATGAATTCTCATGGTGTAATGATCTTCCCAGCTTTTGGACTTTATGCTCAGTATGTGATCTACTTTCCCCAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGAGGCTTCAACGCTTAGATCCTCTTGCAGACGCAACCTCCCGACTCGCCCAAATTGCTAAGGAAGCCGATATTATATTCACACCTTTATCACTCCGGAT
CGTCGCCTCGCACCGTTCCCCTCGCTTCGTCGCCGCACTGCAAATGGCGCACCAATGCTTCACCACCTATTCCGTCGATGGCGATCACTGTTCCAGAGTTTCCCTCGAAT
CCTTCCACGATGCTATGTTAGACGGCGGAACTTCCTCTTCTTCCATGACCATCCATCTTCTTCAAACCATCAATCAAATCATCCTTCGTTTCGAGGCTCCAAAGCATCTC
CCACAAGTGCGTCACGAATTGACACTGTTACCTTCCCAAGAAGCGGATATAGAAGAAATTGATTATGGCAAGTTTTTTTCGATCGACTCACGAGGTTTAAGACGCGTTAT
AAAAGAATTCCCTCTCTTTCTAGAGGATTCAGTTTGTGTTACTGCAACCGATTCGCAAGTCAAATTCTCTATTGCCTCTAAAGAGATTATTTTTATTAGAGAGACTGGAG
GATGTGAAATTGAAGGTTTTGAAGGAGAAGATGAAACTCAAATCCGAATCGTTCTCTATCCCATGATGTTTTTTCTTATTTTGACATATGATGTATATAGGGTTTATTTT
TATAAGACAAAAATGAATTCTCATGGTGTAATGATCTTCCCAGCTTTTGGACTTTATGCTCAGTATGTGATCTACTTTCCCCAAATGTGA
Protein sequenceShow/hide protein sequence
MFLVRLQRLDPLADATSRLAQIAKEADIIFTPLSLRIVASHRSPRFVAALQMAHQCFTTYSVDGDHCSRVSLESFHDAMLDGGTSSSSMTIHLLQTINQIILRFEAPKHL
PQVRHELTLLPSQEADIEEIDYGKFFSIDSRGLRRVIKEFPLFLEDSVCVTATDSQVKFSIASKEIIFIRETGGCEIEGFEGEDETQIRIVLYPMMFFLILTYDVYRVYF
YKTKMNSHGVMIFPAFGLYAQYVIYFPQM