; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015258 (gene) of Snake gourd v1 genome

Gene IDTan0015258
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationLG09:65084673..65085467
RNA-Seq ExpressionTan0015258
SyntenyTan0015258
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7078.28Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQS
        M L  SISTTKKFFKKTLCNFKSFFSN+YHRLPKA  PPF AG EM KD           DVQNGSFTK+NG    NN VHFSKTID+TQM+RVEKNEQS
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQS

Query:  IKIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK
        IKI ATHQRK QEN ES SK  + LY+YDERR+CLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQQ K
Subjt:  IKIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK

KAG6589911.1 hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7068.92Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M+LRASI+ TKKFF KTLCNFKSFFSN+Y RLPKA PPF+ GHEMDKDS               SF KN       N V FSKT+DETQM++VEKNE SI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP
        KI  THQRK QEN         L +YDERRMCLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SSSQQ   I  
Subjt:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP

Query:  KSSMGLVRRRSRLGNLESSSSD
        +SS+GLVRR+SRLGN+ESSSS+
Subjt:  KSSMGLVRRRSRLGNLESSSSD

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]9.7e-7068.61Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M+LRASI+ TKKFF KTLCNFKSFFSN+Y RLPKA PPF+ GHEMDKDS+F                 +NGNA     V FSKT+DETQM++VEKNE SI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP
        KI  THQRK QEN         L +YDERRMCLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SSSQQ   I  
Subjt:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP

Query:  KSSMGLVRRRSRLGNLESSSSDF
        +SS+GLVRR+SRLG +ESSSS F
Subjt:  KSSMGLVRRRSRLGNLESSSSDF

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]3.9e-7177.66Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M L  SISTTKKFFKKT+CNFKSFFSN+YHRLPKAAPPF AG EM KD           +VQNGSFTK+NG    NN VHFSKTID+TQM+RVEKNEQSI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK
        KI ATHQRK QEN ES SK    LY+YDERR+CLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQ  K
Subjt:  KIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK

XP_023515883.1 uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]1.1e-7069.82Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        MLLRASIS TKKFF KTLCN KSFFSN+Y RLPKAAPPF+ GHEMDKDS+F                 +NGNA     VHFSKTIDETQM++VEKNE SI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP
        KI  THQRK QEN         L +YDERRMC VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVDKFFM+IFAEFC+N  SSQQ+  I  
Subjt:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP

Query:  KSSMGLVRRRSRLGNLESSSSD
        +SS GLVRR+SRLGN+ESSSS+
Subjt:  KSSMGLVRRRSRLGNLESSSSD

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145442.9e-6467.38Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQME--RVEKNEQ
        MLLRASIS TKKFFKKT+CNFKSFFS SYHRLPK  PPFAAG  M+KDSTF FISSQ K+VQ+G F KNN NA+     HF   ++ETQME   V+K+  
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQME--RVEKNEQ

Query:  SI-KIRATHQRKRQEN--CESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQV
        S+  I ATHQRKRQEN   ESSSK    Y  DERRMCLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVDKFF EIFAEF +N SSSQ  
Subjt:  SI-KIRATHQRKRQEN--CESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQV

Query:  KSIAPK----SSMGLVRRRSRLGNLESSSSDFF
         +I P+     S+GLV+RR         +SDFF
Subjt:  KSIAPK----SSMGLVRRRSRLGNLESSSSDFF

A0A6J1F4Y2 uncharacterized protein LOC1114409093.0e-6976.77Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQS
        M L  SISTTKKFF+KTLCNFKSFFSN+YHRLPKA  PPF AG EM KD           +VQNGSFTK+NG    NN VHFSKTID+TQM+RVEKNEQS
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQS

Query:  IKIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK
        IKI ATHQRK QEN ES SK  + LY+YDERR+CLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQQ K
Subjt:  IKIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK

A0A6J1H9I9 uncharacterized protein LOC1114613294.7e-7068.61Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M+LRASI+ TKKFF KTLCNFKSFFSN+Y RLPKA PPF+ GHEMDKDS+F                 +NGNA     V FSKT+DETQM++VEKNE SI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP
        KI  THQRK QEN         L +YDERRMCLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SSSQQ   I  
Subjt:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP

Query:  KSSMGLVRRRSRLGNLESSSSDF
        +SS+GLVRR+SRLG +ESSSS F
Subjt:  KSSMGLVRRRSRLGNLESSSSDF

A0A6J1IF62 uncharacterized protein LOC1114722331.9e-7177.66Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M L  SISTTKKFFKKT+CNFKSFFSN+YHRLPKAAPPF AG EM KD           +VQNGSFTK+NG    NN VHFSKTID+TQM+RVEKNEQSI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK
        KI ATHQRK QEN ES SK    LY+YDERR+CLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQ  K
Subjt:  KIRATHQRKRQENCESSSK-CTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVK

A0A6J1JFL9 uncharacterized protein LOC1114852924.7e-6266.21Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI
        M+LRASIS+TKKFF KTLCNFKSFFSN+Y RLPK          MDKDS+F                 +NGNA     VHFSKTI ETQM++VEKNE SI
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSI

Query:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP
        KI ATHQRK QEN         L  YDERRMCLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYL+IVDKFFM+IFAEFC+N  SSQQ   I  
Subjt:  KIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAP

Query:  KSSMGLVRRRSRLGNLESS
        +SS+GLVRR+SRLGN+ESS
Subjt:  KSSMGLVRRRSRLGNLESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein4.6e-0928.12Show/hide
Query:  SISTTKKFFKKTLCNFKS-FFSNSYHRLPKAAP---PFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSIK
        SI    +F KKTL + KS   S+ Y  LP   P   P++      +DS      +Q K+    S+T          V+     + +T  ++   N+    
Subjt:  SISTTKKFFKKTLCNFKS-FFSNSYHRLPKAAP---PFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSIK

Query:  IRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQ
            H++K ++  E        ++  ++R   +A+K+K+L  +D R+VDH+LD+ E L  YS +  P YL+IVD FF +++ EF    +S++
Subjt:  IRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQ

AT3G16070.1 unknown protein3.5e-0929.89Show/hide
Query:  TKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSIKIRATHQRK
        T  FF +TL + KS    +  +LP+    F+         TF   +S + D    SF     + + N++    K        +V++ EQ       HQ K
Subjt:  TKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSIKIRATHQRK

Query:  RQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFA
        + E C S         Y  R    + KKI E+   +  +++ +LD+EE LHYYSR++ P YL IVDKFF ++++
Subjt:  RQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFA

AT3G24535.1 unknown protein6.3e-1129.02Show/hide
Query:  MLLRASISTTKKFFKKTLCNFKSFFSN--SYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQ
        M+LR+SIS T+K F+KT+ NFKSFF N  +YH+LPK                            N + T  N +   +N++  S +    Q +   K+  
Subjt:  MLLRASISTTKKFFKKTLCNFKSFFSN--SYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQ

Query:  SIKIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNV----DHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCS
        +    ++ Q +  +  E+         + + ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFME++++F S
Subjt:  SIKIRATHQRKRQENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNV----DHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTACGAGCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACAGCTACCACAGGCTGCCCAAGGCGGCGCC
ACCCTTCGCCGCCGGTCACGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAATAAAGATGTGCAAAATGGAAGCTTTACGAAGAACAATGGCAATGCTA
TGGCTAATAATGTAGTTCATTTTTCGAAGACGATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATGAACAAAGCATCAAAATTCGAGCGACCCATCAAAGGAAAAGG
CAAGAAAATTGCGAATCGAGTTCGAAGTGTACGACGTTGTACCAGTACGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAGTTAGATGCGAG
AAATGTGGATCATAGTTTGGATATAGAAGAGATTCTTCATTACTACTCTCGGCTCACTTGTCCAACATATCTTGAAATTGTCGACAAATTCTTCATGGAGATTTTTGCTG
AATTTTGTTCAAATTATTCATCTTCTCAACAAGTAAAATCCATTGCGCCAAAATCATCAATGGGGTTAGTGAGAAGAAGATCTCGTTTGGGAAATTTGGAGTCTTCGTCC
TCGGATTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
CTCACTCGCAAGAAGAAAAAAAAAACCCAATGTTGCTACGAGCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAAC
AGCTACCACAGGCTGCCCAAGGCGGCGCCACCCTTCGCCGCCGGTCACGAAATGGATAAAGACTCAACCTTTCATTTCATTTCATCCCAAAATAAAGATGTGCAAAATGG
AAGCTTTACGAAGAACAATGGCAATGCTATGGCTAATAATGTAGTTCATTTTTCGAAGACGATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATGAACAAAGCATCA
AAATTCGAGCGACCCATCAAAGGAAAAGGCAAGAAAATTGCGAATCGAGTTCGAAGTGTACGACGTTGTACCAGTACGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAA
ATTAAAGAGTTGGAAAAGTTAGATGCGAGAAATGTGGATCATAGTTTGGATATAGAAGAGATTCTTCATTACTACTCTCGGCTCACTTGTCCAACATATCTTGAAATTGT
CGACAAATTCTTCATGGAGATTTTTGCTGAATTTTGTTCAAATTATTCATCTTCTCAACAAGTAAAATCCATTGCGCCAAAATCATCAATGGGGTTAGTGAGAAGAAGAT
CTCGTTTGGGAAATTTGGAGTCTTCGTCCTCGGATTTCTTCTAGACCATATTCCTTTGATTTCATTTTTCGTAAGTTGTAATGGGAATTTGATTTAGTGTTTATGATTCA
TCTCGGTTCATAAATTTTATGGTAG
Protein sequenceShow/hide protein sequence
MLLRASISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGHEMDKDSTFHFISSQNKDVQNGSFTKNNGNAMANNVVHFSKTIDETQMERVEKNEQSIKIRATHQRKR
QENCESSSKCTTLYQYDERRMCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDKFFMEIFAEFCSNYSSSQQVKSIAPKSSMGLVRRRSRLGNLESSS
SDFF