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Tan0015272 (gene) of Snake gourd v1 genome

Gene IDTan0015272
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:11078642..11078833
RNA-Seq ExpressionTan0015272
SyntenyTan0015272
Gene Ontology termsGO:0006897 - endocytosis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34048.1 hypothetical protein [Cucumis melo subsp. melo]1.6e-1777.94Show/hide
Query:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR  G+ Y  +  D+S E+RRRMWPSDEDR  RWVAEPGIDRKASAFIARFYEARVSDPERQT SL
Subjt:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
KAG6597601.1 hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2085.25Show/hide
Query:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        GGR +GY  WDES EIRRRMWPSDED RWVAEPGIDRKASAFIARFY+ARVSDPERQT S+
Subjt:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
KAG7029045.1 hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2085.25Show/hide
Query:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        GGR +GY  WDES EIRRRMWPSDED RWVAEPGIDRKASAFIARFY+ARVSDPERQT S+
Subjt:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
XP_022138231.1 uncharacterized protein LOC111009454 [Momordica charantia]1.7e-1983.33Show/hide
Query:  MGGRGD---GYNNWDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR     GY  WDESAEIRRRMWPSDEDR RWVAEPGIDRKASAFIARFYEARVSDP+RQTF++
Subjt:  MGGRGD---GYNNWDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
XP_022935735.1 uncharacterized protein LOC111442555 [Cucurbita moschata]4.4e-2083.61Show/hide
Query:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        GGR +GY  WDES EIRRRMWPSDED RWVAEPGIDRKASAFIARFY+ARVSDPERQT ++
Subjt:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
TrEMBL top hitse value%identityAlignment
A0A0A0LAW1 Uncharacterized protein9.9e-1876.81Show/hide
Query:  MGGRG-----DGYNNWDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR      +G+   D+S EIRRRMWPSDEDR  RWVAEPGIDRKASAFIARFYEARVSDPERQT SL
Subjt:  MGGRG-----DGYNNWDESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
A0A5A7U8R2 Uncharacterized protein7.6e-1877.94Show/hide
Query:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR  G+ Y  +  D+S E+RRRMWPSDEDR  RWVAEPGIDRKASAFIARFYEARVSDPERQT SL
Subjt:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
A0A6J1C955 uncharacterized protein LOC1110094548.1e-2083.33Show/hide
Query:  MGGRGD---GYNNWDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR     GY  WDESAEIRRRMWPSDEDR RWVAEPGIDRKASAFIARFYEARVSDP+RQTF++
Subjt:  MGGRGD---GYNNWDESAEIRRRMWPSDEDR-RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
A0A6J1FBH6 uncharacterized protein LOC1114425552.1e-2083.61Show/hide
Query:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        GGR +GY  WDES EIRRRMWPSDED RWVAEPGIDRKASAFIARFY+ARVSDPERQT ++
Subjt:  GGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
E5GC50 Uncharacterized protein7.6e-1877.94Show/hide
Query:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
        MGGR  G+ Y  +  D+S E+RRRMWPSDEDR  RWVAEPGIDRKASAFIARFYEARVSDPERQT SL
Subjt:  MGGR--GDGYNNW--DESAEIRRRMWPSDEDR--RWVAEPGIDRKASAFIARFYEARVSDPERQTFSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein9.5e-0544.23Show/hide
Query:  NNWDES--AEIRRRMWPSDEDR-RW-VAEPGIDRKASAFIARFYEARVSDPE
        +NW+E     +R R+  +D+D   W +AEP IDR+A+AFIA+F+E  + D E
Subjt:  NNWDES--AEIRRRMWPSDEDR-RW-VAEPGIDRKASAFIARFYEARVSDPE
AT3G05858.1 unknown protein2.3e-1159.32Show/hide
Query:  RGDGYNNWDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIARFYEARVSDPERQTFS
        R +   +WD+    R+ M  SDED+R WVAEPGIDRKASAFIA+F+  RVS+ ERQT S
Subjt:  RGDGYNNWDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIARFYEARVSDPERQTFS
AT5G26620.1 unknown protein8.0e-1264.71Show/hide
Query:  NWDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIARFYEARVSDPERQT
        +WD+     R+ W SDED+R WVAEPGIDRKASAFIA+F+ +RVS+ ERQT
Subjt:  NWDESAEIRRRMWPSDEDRR-WVAEPGIDRKASAFIARFYEARVSDPERQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAGAGGGGATGGTTATAATAATTGGGATGAAAGTGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATAGAAGATGGGTTGCTGAGCCTGGAATTGA
TCGTAAAGCTTCTGCTTTTATTGCTAGATTTTATGAAGCTCGTGTTTCTGACCCTGAACGCCAAACTTTCTCTCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAGAGGGGATGGTTATAATAATTGGGATGAAAGTGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATAGAAGATGGGTTGCTGAGCCTGGAATTGA
TCGTAAAGCTTCTGCTTTTATTGCTAGATTTTATGAAGCTCGTGTTTCTGACCCTGAACGCCAAACTTTCTCTCTTAATTAA
Protein sequenceShow/hide protein sequence
MGGRGDGYNNWDESAEIRRRMWPSDEDRRWVAEPGIDRKASAFIARFYEARVSDPERQTFSLN