; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015288 (gene) of Snake gourd v1 genome

Gene IDTan0015288
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationLG07:71066288..71068855
RNA-Seq ExpressionTan0015288
SyntenyTan0015288
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006048 - UDP-N-acetylglucosamine biosynthetic process (biological process)
GO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004610 - phosphoacetylglucosamine mutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8522098.1 hypothetical protein F0562_012588 [Nyssa sinensis]2.0e-4670.8Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      CLH  K+  L ILVSGGIVLQ LACALYNNWWP+LS +MYVLLPMPLLFFAGSDTSSL+SESG+ WV+ TKFLTGAS++GSIAIPAILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNI
        A +IGWGALA++LSS  +FV+AI CY+ M+++D Y++
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNI

XP_021599879.1 vacuolar protein sorting-associated protein 55 homolog [Manihot esculenta]1.2e-4673.19Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      CL   K+  L ILVSGGI+LQ LACALYNNWWP+LSV+MYVLLPMPLLFFAGSD+SSL SES + WVN TKFLTGASAVGSIAIPAILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M++ED Y+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

XP_022155500.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]2.6e-4672.93Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      C  M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFF GSD+SSL +ES D W+N TKFLTGAS +GSIAIP ILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNED
        A IIGWGALA+DLSS LVFV+AI C+LWM+ +D
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNED

XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]1.5e-5787.31Show/hide
Query:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADII
        MADLG C HMSK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSDTSSL SESGD WVN TKFLTGAS VGSIAIP ILKHA+II
Subjt:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADII

Query:  GWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        GWGALALDLSSLLVFVVAI CYLWMSNED YN L
Subjt:  GWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

XP_038679642.1 vacuolar protein sorting-associated protein 55 homolog [Tripterygium wilfordii]9.0e-4772.46Show/hide
Query:  MADL----GNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL     +CLH  K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSD S+L+SES D WVN TKFLTGASAVGSIAIP ILKH
Subjt:  MADL----GNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M  ED Y++L
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

TrEMBL top hitse value%identityAlignment
A0A2C9U468 Uncharacterized protein5.7e-4773.19Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      CL   K+  L ILVSGGI+LQ LACALYNNWWP+LSV+MYVLLPMPLLFFAGSD+SSL SES + WVN TKFLTGASAVGSIAIPAILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M++ED Y+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

A0A5J4ZWP6 Phosphoacetylglucosamine mutase9.7e-4770.8Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      CLH  K+  L ILVSGGIVLQ LACALYNNWWP+LS +MYVLLPMPLLFFAGSDTSSL+SESG+ WV+ TKFLTGAS++GSIAIPAILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNI
        A +IGWGALA++LSS  +FV+AI CY+ M+++D Y++
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNI

A0A6J1DML0 vacuolar protein sorting-associated protein 55 homolog1.3e-4672.93Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL      C  M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFF GSD+SSL +ES D W+N TKFLTGAS +GSIAIP ILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNED
        A IIGWGALA+DLSS LVFV+AI C+LWM+ +D
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNED

A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog7.1e-5887.31Show/hide
Query:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADII
        MADLG C HMSK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSDTSSL SESGD WVN TKFLTGAS VGSIAIP ILKHA+II
Subjt:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADII

Query:  GWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        GWGALALDLSSLLVFVVAI CYLWMSNED YN L
Subjt:  GWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

A0A7J7CJN6 Vacuolar protein sorting 55 (VPS55) family protein isoform 14.3e-4772.46Show/hide
Query:  MADL----GNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH
        MADL     +CLH  K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSD S+L+SES D WVN TKFLTGASAVGSIAIP ILKH
Subjt:  MADL----GNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M  ED Y++L
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDIYNIL

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 555.9e-0928.46Show/hide
Query:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALA
        ++K+++L   ++ G +L  L+CAL++N++PL  +++++L P+P  +F AG+   TS  +S+S +   +   FLTG      IA+P +  H  +IG  +  
Subjt:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALA

Query:  LDLSSLLVFVVAIFCYLWMSNED
        + +   L+   +I  + W   +D
Subjt:  LDLSSLLVFVVAIFCYLWMSNED

Q32PD8 Leptin receptor overlapping transcript-like 11.2e-0431.3Show/hide
Query:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTK----FLTGASAVGSIAIPAILKHADIIGWGALALDLSSLLVFV
        G++   L CAL  YN +WPL  +  Y+L P+P         +  + +  D   N  K    FLT    V +  +P +   A++I WGA AL L+   V  
Subjt:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTK----FLTGASAVGSIAIPAILKHADIIGWGALALDLSSLLVFV

Query:  VAI--FCYLWMSNED
          I  F  ++ SN+D
Subjt:  VAI--FCYLWMSNED

Q54VP1 Vacuolar protein sorting-associated protein 55 homolog4.7e-0633.33Show/hide
Query:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALALDLSSLLVFVVAIFCY
        G++   LAC + ++ +P++ V  Y L P P +     D+ S  SE G  + +   FLTG       AIP IL H+DII   ALA  ++  +     I  +
Subjt:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALALDLSSLLVFVVAIFCY

Query:  LWMSN
        LW  N
Subjt:  LWMSN

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.8e-4271.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL

Q9UUH1 Vacuolar protein sorting-associated protein 554.2e-0726.02Show/hide
Query:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTS-SLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALALD
        + K++ L  +++ G +L  L+CAL+ NW+PLL V+ ++L P+P L      TS   + E     ++  +F  GA+     A+P +  +  +IG  A  + 
Subjt:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTS-SLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALALD

Query:  L--SSLLVFVVAIFCYLWMSNED
            S++  V+ ++   ++ +E+
Subjt:  L--SSLLVFVVAIFCYLWMSNED

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.3e-4371.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.3e-4371.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.3e-4371.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein1.3e-4371.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein1.3e-4371.67Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSD++SL +ES + W+N  KFLTGASAVGS+AIP+ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYL
        ALALDLSS +VF+VAI  Y+
Subjt:  ALALDLSSLLVFVVAIFCYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTTGGGAAACTGCTTGCATATGAGCAAAGTTGTAACACTAGGAATCTTGGTTTCTGGAGGGATTGTATTGCAGTTTCTGGCATGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGTGTGGTTATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCAGATACTTCTTCGTTGATTTCCGAATCTGGAGATGGCTGGGTGA
ACACGACTAAGTTTTTAACTGGAGCTTCAGCGGTCGGAAGCATCGCCATACCTGCAATTTTGAAGCATGCTGATATTATCGGATGGGGAGCACTCGCACTGGACCTCTCG
TCCCTTCTAGTGTTCGTGGTGGCCATTTTTTGTTATCTATGGATGAGCAATGAAGACATCTACAATATACTGTAA
mRNA sequenceShow/hide mRNA sequence
CCTAATCGAAATTCCAGGCGAGGGATAGCTCGAAGTAAGAATATCAAATGAAAGGGCGTAGCTGAATTCTGTGACACCTTCACTCTAGCTCTTCCAAATCCGACGAGCTT
CCGATATTGATCGAGTCGAACTGATTAATTTCATCGCTGTCTGTTCTTTTACGGAAATCTTAGTTGTTTTCCTTAATGAAGTGAGAAGGATTACCTGATGGCGGACTTGG
GAAACTGCTTGCATATGAGCAAAGTTGTAACACTAGGAATCTTGGTTTCTGGAGGGATTGTATTGCAGTTTCTGGCATGTGCTTTGTACAATAACTGGTGGCCATTGCTG
AGTGTGGTTATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCAGATACTTCTTCGTTGATTTCCGAATCTGGAGATGGCTGGGTGAACACGACTAAGTT
TTTAACTGGAGCTTCAGCGGTCGGAAGCATCGCCATACCTGCAATTTTGAAGCATGCTGATATTATCGGATGGGGAGCACTCGCACTGGACCTCTCGTCCCTTCTAGTGT
TCGTGGTGGCCATTTTTTGTTATCTATGGATGAGCAATGAAGACATCTACAATATACTGTAAAACCTGAAGCATTCTTCGCTCTAATGGAGACATCCTACAGGACAACAT
AAAATCAAGCATCTTATGTGAAAGAAGCAAATGATTATCAAGAGTAGAAGGAATTTCAGTAGGTAAGTTTTGACATATTTTGAATTTCAACTTCCCATCAAAGCCCCCCT
TCTCCATCCATTAGGGGGTTCAACCAGTCTTTAGGAATCATTTGTTAATGTCAATTGGAACGCTTTTTCTTAAGCTGTCGAAGCTTCGCATGTGAATTCCTTATCCTCTC
CTTTTTGTATCCCTTCTTAGATTAATGAAAGTGTGTTTCTTATTGAAATAAAATAGGAATTTCATTGACTATTTTTTTATTCGTATTCAACAAAATGTAAGTATTTCGGT
TAGCTTGCACACACGTGGACAATTGTCTAACCTTATTATATTCGATTGTAGAGATAACTTGATATTAAATCTAAAGGGGTGAAAATTGGACTTTACCACTTGTTTTGTGT
GAATATCCGTAAACATTCGGATCAGCTTGCACACCCCTAGACAATTATCTAGACAATTATC
Protein sequenceShow/hide protein sequence
MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDTSSLISESGDGWVNTTKFLTGASAVGSIAIPAILKHADIIGWGALALDLS
SLLVFVVAIFCYLWMSNEDIYNIL