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Tan0015298 (gene) of Snake gourd v1 genome

Gene IDTan0015298
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein mitochondrial
Genome locationLG07:8786012..8787961
RNA-Seq ExpressionTan0015298
SyntenyTan0015298
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016815.1 hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-4095.35Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
XP_008437637.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo]5.2e-4098.85Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
XP_011654597.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus]2.1e-41100Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
XP_022922222.1 uncharacterized protein LOC111430272 [Cucurbita moschata]6.8e-4096.51Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
XP_031742148.1 uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]2.1e-41100Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
TrEMBL top hitse value%identityAlignment
A0A0A0KLU3 Uncharacterized protein1.0e-41100Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
A0A1S3AU63 uncharacterized protein LOC1034829842.5e-4098.85Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
A0A6J1C970 uncharacterized protein LOC1110091309.6e-4097.7Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC STSSS VIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVNDVANLPV
A0A6J1E5Z9 uncharacterized protein LOC1114302723.3e-4096.51Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
A0A6J1ID63 uncharacterized protein LOC1114715019.6e-4094.19Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSTCL+YEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein6.9e-1467.27Show/hide
Query:  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPL
        N ST  S EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ EE+H+RPL
Subjt:  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPL
AT4G24026.1 unknown protein8.4e-1256.14Show/hide
Query:  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDPEEAHDRPL
        N ST  S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D +E+H RPL
Subjt:  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDPEEAHDRPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCAGAGCACCTGCTTGTCCTACGAGAAGCTCAACGGCATGGCCACCTGGGTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTG
CATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGAAGAGGCTCACGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGC
TTCCTCCGCCGGTCAACGACGTCGCTAATCTCCCCGTCTGA
mRNA sequenceShow/hide mRNA sequence
GATTAGGCAGATTAATTTGTGTTTGAATTGGTCTATGTTAATCTAATAATAGGAAATTAAAATTGAAATGAAGAAATTAAAAAGGTGTTTGACGACCCTTCTCCTTCGTC
TTCGCTAATTTTGTCTCTGTGTTTTTTTACAGAAGATCCAAGGCAGGCAACAAGAAACCCGTCATAGCCATGGAGAATCAGAGCACCTGCTTGTCCTACGAGAAGCTCAA
CGGCATGGCCACCTGGGTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGAAG
AGGCTCACGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAACGACGTCGCTAATCTCCCCGTCTGA
CCGCCCGCTCTCCACGGATCTGAGAGCAGGAACATGGCCACACAGCTTGGTTACCAGAAAGCTTTAACAGAAATGGCAGAACAAAGCAGGGGAACAAGGAAACTGCAAAT
ATTCACTATTTAAATACCACAATTTAATGTAGAAAGAATATTTAGATTATCTTCACACATAGACAAGTGAAGGGCAGCTCTTTTTCTTTATTCTTTTTAACGTTGTAATG
TTGTAATCTTGGTTTCTTAATTGTCAAGTCCTGCAAAAGTAAATGTATAAAAATAATTTGAATATGATCAAATCCATTTCATTCACAATCCAATCATCAACATCAAATTC
AAATA
Protein sequenceShow/hide protein sequence
MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV