; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015307 (gene) of Snake gourd v1 genome

Gene IDTan0015307
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L18a-like protein
Genome locationLG05:77163848..77168055
RNA-Seq ExpressionTan0015307
SyntenyTan0015307
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]5.8e-7487.42Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP +QYHYGTFQGVANYY+S     PQPQPQSV GFPQPVA P VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLAVIAITFGIT G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]3.1e-7588.68Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP +QYHYGTFQGVANYY+S     PQPQPQSV GFPQPVAPP VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLAVIAITFGIT G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]3.1e-7588.05Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSA----PQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGK+SAV GDPQ+QYHYGTFQGVANYY SA    PQPQP SV GFPQPVAPP VSG HP YHGHLGYQAVPVQGYAIIEGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSA----PQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLA++AITFG+TKGAE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]5.5e-7284.91Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAP+PQ    PQSV GFP  VAPP    +HPCYHGHL YQAVPVQGYAIIEGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLAV+AITFG++KG E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]5.6e-7791.61Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFM
        MSGDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAPQ QPQS  GFPQPV P GVSG HPCYHGHLGYQAVPVQGYAIIE RPF+EARLPCCGIGMGWFLFM
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFM

Query:  IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLAVIAITFGIT G E W
Subjt:  IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein2.8e-7487.42Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP +QYHYGTFQGVANYY+S     PQPQPQSV GFPQPVA P VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLAVIAITFGIT G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.5e-7588.68Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP +QYHYGTFQGVANYY+S     PQPQPQSV GFPQPVAPP VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSS----APQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLAVIAITFGIT G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

A0A6J1CGC1 60S ribosomal protein L18a-like protein1.5e-7588.05Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSA----PQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGK+SAV GDPQ+QYHYGTFQGVANYY SA    PQPQP SV GFPQPVAPP VSG HP YHGHLGYQAVPVQGYAIIEGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSA----PQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLA++AITFG+TKGAE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

A0A6J1EHH7 60S ribosomal protein L18a-like protein2.6e-7284.91Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MSGDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAP+PQ    PQSV GFP  VAPP    +HPCYHGHL YQAVPVQGYAIIEGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLAV+AITFG++KG E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

A0A6J1KIR0 60S ribosomal protein L18a-like protein1.3e-7184.91Show/hide
Query:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW
        MS DGKSSAVFGDPQ+QYHYGTFQGVANYYSSAPQPQ    PQSV GFP  VAPP    +HPCYHGHL YQAVPVQGYAIIEGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQ----PQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLAV+AITFG++KG E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein9.8e-3251.68Show/hide
Query:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG
        Q+QY+YGTFQGVAN+ +  P PQ      F QP  P    PG + Q+   H G + Y     V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  G
Subjt:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG

Query:  GIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        GIPWY+GAFIVL   VD+REK GYVAC IASV+ +IA+  G+T     W
Subjt:  GIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family3.9e-4458.06Show/hide
Query:  DGKSSAVFGDPQNQYH-YGTFQGVANYYSSAPQPQPQS-VAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMI
        + KS     +  NQ+H YGTFQGV+NY    P PQ  + V GFPQP APPGV      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFLF++
Subjt:  DGKSSAVFGDPQNQYH-YGTFQGVANYYSSAPQPQPQS-VAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMI

Query:  GFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA IA+  G++KGA+ W
Subjt:  GFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

AT1G29970.1 60S ribosomal protein L18A-17.0e-3351.68Show/hide
Query:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG
        Q+QY+YGTFQGVAN+ +  P PQ      F QP  P    PG + Q+   H G + Y     V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  G
Subjt:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG

Query:  GIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        GIPWY+GAFIVL   VD+REK GYVAC IASV+ +IA+  G+T     W
Subjt:  GIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

AT1G29970.2 60S ribosomal protein L18A-11.0e-2853.85Show/hide
Query:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG
        Q+QY+YGTFQGVAN+ +  P PQ      F QP  P    PG + Q+   H G + Y     V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  G
Subjt:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLG

Query:  GIPWYVGAFIVLFVRVDYREKPGYVACVIA
        GIPWY+GAFIVL   VD+REK GYVAC IA
Subjt:  GIPWYVGAFIVLFVRVDYREKPGYVACVIA

AT1G29970.3 60S ribosomal protein L18A-19.7e-2740.31Show/hide
Query:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFL--------
        Q+QY+YGTFQGVAN+ +  P PQ      F QP  P    PG + Q+   H G + Y     V V  Y ++E RP  E  LPCCG+GMGWFL        
Subjt:  QNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAP----PGVSGQHPCYH-GHLGYQ---AVPVQGYAIIEGRPFQEARLPCCGIGMGWFL--------

Query:  ----------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
                                          F++GF  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ +IA+  G+T     W
Subjt:  ----------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW

AT1G53560.1 Ribosomal protein L18ae family1.8e-3351.43Show/hide
Query:  YGTFQGVANY----YSSAPQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF
        YGTFQGV  Y    Y   P   P  V G PQP  PPG        H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG F
Subjt:  YGTFQGVANY----YSSAPQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF

Query:  IVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW
        I++  R+D REKPGYVAC IA+V+A I I FG+  G   W
Subjt:  IVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAGCAGCGCGGTATTTGGCGATCCACAGAATCAATACCATTACGGTACGTTTCAGGGCGTCGCGAATTATTATTCTTCTGCCCCACAACCACA
GCCCCAATCTGTCGCCGGTTTCCCTCAGCCGGTTGCGCCGCCCGGAGTTTCTGGCCAACACCCTTGTTACCATGGACATCTCGGTTATCAAGCCGTTCCAGTTCAAGGTT
ATGCTATTATTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTCATGATTGGTTTCTTTCTTGGTGGCATTCCCTGG
TATGTTGGAGCTTTTATCGTACTCTTTGTACGGGTCGATTACCGAGAGAAGCCTGGATATGTTGCATGTGTAATCGCTTCAGTTCTTGCCGTCATTGCTATAACATTTGG
TATCACCAAGGGAGCTGAGTTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
AAATAATGTCCGTGACTGTGAGAACCGAAATGGAGTTCCAATTCCGCCCGGTTTTAGCAAATATTGCCAGCTGTACAACTCCGATTCATCAAAATCAGAAGATCACCGCA
TTATCAAAAACCGGAAACAGCCACTCTCTTTCCGCCATAGCTCCGTCGCTCCAAAATTTTCCGGCGAAACCGCAGAAGAAGAAGAGAAAAGCGACGACGGGACCCTCGCC
GTCGCCTTGATTTTCAAGATACCGTCTCTAATTCTTCATCTGCAAATAATATGAGTGGCGACGGGAAAAGCAGCGCGGTATTTGGCGATCCACAGAATCAATACCATTAC
GGTACGTTTCAGGGCGTCGCGAATTATTATTCTTCTGCCCCACAACCACAGCCCCAATCTGTCGCCGGTTTCCCTCAGCCGGTTGCGCCGCCCGGAGTTTCTGGCCAACA
CCCTTGTTACCATGGACATCTCGGTTATCAAGCCGTTCCAGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCA
TGGGCTGGTTCTTGTTCATGATTGGTTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGGGTCGATTACCGAGAGAAGCCTGGATAT
GTTGCATGTGTAATCGCTTCAGTTCTTGCCGTCATTGCTATAACATTTGGTATCACCAAGGGAGCTGAGTTCTGGTGAAGGAGACATCATGTAATTAGCTTTGAAATTGT
ATTCTTTCAATCTCTATATATCAACTTCTTATTGGTTTCCTCTACCATATACTGAAATTTTCCTGACTTGCCAAATATGAAATGTTAATAGATTGAAGAAGAAATTAAAA
TTAATTACTAGCTTTGTTGGAAGGGTATTTTTGAAAAAAAAAATTCGTTTAAATATTTGTGAGTCTAAGTTAGATTGCAGGCACCTCAACTACTCTTACAACTATTCTTA
CAACTGCCTTATCCTACTCTGTGGTTGTCGAGGATATTCTTTGGATGAATAATTTCTTGAACGTATATATCCTTTTTTTTAAGTCCTTGCTCTATTTATACTAGCCTTTA
TGTATCTAACTGCACTTTTTTGTTTTTGATTTTATAGTTACAGGCAGCTTATTAATTCAGA
Protein sequenceShow/hide protein sequence
MSGDGKSSAVFGDPQNQYHYGTFQGVANYYSSAPQPQPQSVAGFPQPVAPPGVSGQHPCYHGHLGYQAVPVQGYAIIEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW
YVGAFIVLFVRVDYREKPGYVACVIASVLAVIAITFGITKGAEFW