; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015331 (gene) of Snake gourd v1 genome

Gene IDTan0015331
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA exonuclease 4
Genome locationLG01:108498901..108502902
RNA-Seq ExpressionTan0015331
SyntenyTan0015331
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146040.1 RNA exonuclease 4 [Cucumis sativus]6.4e-12187.17Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        M+ QLKK PK K LNPNWALLQQKL PHGS H  S+ V KS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+ VAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPK DVRDTSEY FFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFL +EIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

XP_008463709.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]7.3e-12588.3Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        M  QLKK PK K LNPNWA+LQQKLKPHGS HS++S VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+ VAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDTSEY FFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFLG++IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

XP_038897120.1 RNA exonuclease 4 isoform X1 [Benincasa hispida]8.9e-12387.55Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQ--------KLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQ
        ME QLKKT K K LNPNWALLQQ        KLKP GS HSRSS VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+VVAMDCEMVGVGQ
Subjt:  MEIQLKKTPKSKQLNPNWALLQQ--------KLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQ

Query:  GNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKE
        GNKSALGRVTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRPSDLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK+DVRDTSEY FFQKE
Subjt:  GNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKE

Query:  GCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        GCRRALRHLAAEFLG+EIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E+KLKLKQKKRK RKK+KD  GFE
Subjt:  GCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

XP_038897121.1 RNA exonuclease 4 isoform X2 [Benincasa hispida]6.8e-12387.87Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQ-------KLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQG
        ME QLKKT K K LNPNWALLQQ       KLKP GS HSRSS VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+VVAMDCEMVGVGQG
Subjt:  MEIQLKKTPKSKQLNPNWALLQQ-------KLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQG

Query:  NKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEG
        NKSALGRVTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRPSDLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK+DVRDTSEY FFQKEG
Subjt:  NKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEG

Query:  CRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        CRRALRHLAAEFLG+EIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E+KLKLKQKKRK RKK+KD  GFE
Subjt:  CRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

XP_038897122.1 RNA exonuclease 4 isoform X3 [Benincasa hispida]5.6e-12590.19Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        ME QLKKT K K LNPNWALLQQKLKP GS HSRSS VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+VVAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRPSDLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK+DVRDTSEY FFQKEGCRRALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFLG+EIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E+KLKLKQKKRK RKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

TrEMBL top hitse value%identityAlignment
A0A0A0KZK3 RNA exonuclease 43.1e-12187.17Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        M+ QLKK PK K LNPNWALLQQKL PHGS H  S+ V KS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+ VAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPK DVRDTSEY FFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFL +EIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

A0A1S3CJW0 RNA exonuclease 43.5e-12588.3Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        M  QLKK PK K LNPNWA+LQQKLKPHGS HS++S VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+ VAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDTSEY FFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFLG++IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

A0A6J1CDP9 RNA exonuclease 41.3e-11986.59Show/hide
Query:  QLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGRVTL
        QLK +PK KQ+NPNWALLQQKLK H S H R SNVPK D +SNSVLGKRKERSDV+S  S K LLIPVNDDFS+T+VVAMDCEMVGVGQGN+SALGRVTL
Subjt:  QLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGRVTL

Query:  VNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRHLAA
        VNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQK+VA+LIKGKI+VGHAL ND KALLLSHPKKD+RDTSEY FFQKEGCRRALRHLAA
Subjt:  VNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRHLAA

Query:  EFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGF
        EFLG+EIQNGEHCP+EDARSAMLLYQKKRKEWEKS+KSEMKLKLKQKKRKPRKK+KD  GF
Subjt:  EFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGF

A0A6J1FBB2 RNA exonuclease 48.4e-11985.66Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        ME QLKK+ K K LNPNWALLQQKL PHGS   RSS+VPKS+ASS ++LGKRK+RSD ES+ S KKLLIPVNDDFSLT+VVAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VT+VNKWGNVIYDEFVRP+ERVVDFRT+ISGIRP DL+KAKDFPTVQKRVAELIKG+ILVGHALRNDLKALLLSHPKKDVRDTSEY FFQ+ GCRRALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAE LG+EIQNGEHCPVEDARSAMLLYQKK KEWEKSVK+E+KLKLKQKKRKPRKK+KD  G E
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

E5GBF8 RNA exonuclease 43.5e-12588.3Show/hide
Query:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR
        M  QLKK PK K LNPNWA+LQQKLKPHGS HS++S VPKS+ASS ++LGKRKERSDVESN SQK +LIPVNDDFSLT+ VAMDCEMVGVGQGNKSALGR
Subjt:  MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH
        VTLVNKWGNVIYDEFVRP+ERVVDFRTQISGIRP DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDTSEY FFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRH

Query:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE
        LAAEFLG++IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKK+KD  GFE
Subjt:  LAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 43.0e-4150.59Show/hide
Query:  NDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKA
        N    + + +AMDCE VGVG +G +SAL R+++VN +G+V+ DEFV+P E+VV++RT +SGI+P  +K A  F   QK+ A++++G+ILVGHAL++DL+A
Subjt:  NDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKA

Query:  LLLSHPKKDVRDTSEYPFFQK---EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEK
        L+LSHPK  +RDTS +  F+K   +G   +L+ L  E L I IQ GEH  VEDAR+ MLLY+K++ E+EK
Subjt:  LLLSHPKKDVRDTSEYPFFQK---EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEK

Q6DEW6 RNA exonuclease 45.6e-4347.69Show/hide
Query:  KKLLIPVNDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHA
        +K+L+       LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++VRP ERV D+RT +SGIRP D+K  + F  VQ  VAE+++G+ LVGHA
Subjt:  KKLLIPVNDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHA

Query:  LRNDLKALLLSHPKKDVRDTSEY-PFFQK-EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRK
        + NDLK L L HPKK +RDT +Y PF +K +  R +L+ L  + L +++Q GEHC V+DA++AM LY  ++K WE ++K++       K + P+K
Subjt:  LRNDLKALLLSHPKKDVRDTSEY-PFFQK-EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRK

Q6PAQ4 RNA exonuclease 41.7e-4447.59Show/hide
Query:  VESNLSQKKLLIPVNDDFS---LTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAEL
        V   L QKK  I +  + +   LT+ +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+ ++F  V+K VAE+
Subjt:  VESNLSQKKLLIPVNDDFS---LTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAEL

Query:  IKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQK--EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKS
        +KG+ILVGHAL NDLK L L HPKK +RDT ++  F+   +  R +L+ L+ + LGI +Q  EHC ++DA++AM LY   ++EWE S
Subjt:  IKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQK--EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKS

Q91560 RNA exonuclease 42.3e-4447.96Show/hide
Query:  KLLIPVNDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHAL
        K+L+       LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++V+P ERV D+RT +SGIRP D+KK + F  VQK V+E+++G+ LVGHA+
Subjt:  KLLIPVNDDFSLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHAL

Query:  RNDLKALLLSHPKKDVRDTSEY-PFFQK-EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMK--LKLKQKKRKPRK
         NDLK L L HPKK +RDT +Y PF QK +  R +L+ L  + L +++Q GEHC V+DA++AM LY  ++K WE ++K++    + + +K + P+K
Subjt:  RNDLKALLLSHPKKDVRDTSEY-PFFQK-EGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMK--LKLKQKKRKPRK

Q9GZR2 RNA exonuclease 46.6e-4450Show/hide
Query:  LTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH
        LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+ ++   VQK VAE++KG+ILVGHAL NDLK L L H
Subjt:  LTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH

Query:  PKKDVRDTSEYPFF--QKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKL
        PKK +RDT +Y  F  Q +  R +LR L+ + LG+++Q  EHC ++DA++AM LY   +KEWE   +    L
Subjt:  PKKDVRDTSEYPFF--QKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKL

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein4.7e-2136.09Show/hide
Query:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN
        S  + +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+
Subjt:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN

Query:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE
        D+  L L +P   +RDT++Y P  +     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +
Subjt:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE

AT2G48100.2 Exonuclease family protein4.7e-2136.09Show/hide
Query:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN
        S  + +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+
Subjt:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN

Query:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE
        D+  L L +P   +RDT++Y P  +     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +
Subjt:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE

AT2G48100.3 Exonuclease family protein4.7e-2136.09Show/hide
Query:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN
        S  + +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+
Subjt:  SLTEVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALRN

Query:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE
        D+  L L +P   +RDT++Y P  +     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +
Subjt:  DLKALLLSHPKKDVRDTSEY-PFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVEDARSAMLLYQKKRKE

AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-9268.9Show/hide
Query:  KKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGRVTLVN
        K TPK  QLNPNW+LLQQKLK     ++R S+ P+   + +S+LGKRKER D E ++ +   L PVNDD SLT+ VAMDCEMVGV QG KSALGRVTLVN
Subjt:  KKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGRVTLVN

Query:  KWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRHLAAEF
        KWGNV+YDEFVRP+E VVDFRT ISGIRP DL+KAKDF   Q +VAELIKGKILVGHAL NDLKALLL+HPKKD+RDT EY  F K   R++L+HLA+E 
Subjt:  KWGNVIYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRHLAAEF

Query:  LGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAK
        LG +IQNGEHCP++DAR+AM+LYQK RKEWEK+VK + ++ LKQKKRKP+KKAK
Subjt:  LGIEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAK

AT3G27970.1 Exonuclease family protein1.0e-2030.41Show/hide
Query:  SSNSVLGKRKERSDVESNLSQKKLLIPVND----DFSLT---EVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPS
        +S  +  +R + S V S L+ +   + + D    D++ +    VVA+ C+MVG G  G+     RV + ++  NVI+  +V+P   V  +R + +GIRP 
Subjt:  SSNSVLGKRKERSDVESNLSQKKLLIPVND----DFSLT---EVVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTQISGIRPS

Query:  DLKKAKDFPTVQKRVAELI--------------KGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEG-CRRALRHLAAEFLGIEIQNGEHCPVED
        +L+ A     VQ+++ E +              K +ILVGH L +DL  L L +P   +RDT++YP   K      +L++L   +LG ++  G   P ED
Subjt:  DLKKAKDFPTVQKRVAELI--------------KGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEG-CRRALRHLAAEFLGIEIQNGEHCPVED

Query:  ARSAMLLYQKKRKEWEK
          + M LY + R +  K
Subjt:  ARSAMLLYQKKRKEWEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTCAGCTCAAGAAGACCCCTAAATCCAAACAGCTCAACCCCAATTGGGCGCTACTCCAACAAAAGCTGAAACCCCATGGTTCAATCCACTCAAGGTCCTCTAA
TGTTCCAAAATCCGACGCTTCTTCAAATAGCGTTTTAGGTAAACGCAAGGAAAGATCTGACGTGGAGTCAAATCTTTCTCAGAAGAAACTTCTCATTCCAGTGAACGATG
ACTTTAGTCTTACAGAAGTAGTAGCTATGGATTGCGAAATGGTTGGCGTGGGTCAAGGTAACAAAAGTGCCCTTGGACGAGTTACACTGGTAAACAAATGGGGAAATGTT
ATATACGATGAGTTTGTGCGCCCTATGGAGCGTGTTGTTGACTTTCGGACTCAAATTAGTGGCATAAGACCCAGCGACCTGAAGAAAGCAAAGGATTTTCCAACAGTCCA
GAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGGCATGCCTTGCGTAATGATCTTAAGGCATTGCTCTTAAGTCATCCCAAGAAGGATGTGAGAGACACCT
CCGAGTATCCATTCTTCCAGAAGGAAGGATGTAGAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGCATTGAGATCCAAAATGGGGAACACTGCCCTGTAGAAGAC
GCTCGTTCTGCAATGCTGCTCTATCAAAAGAAGAGAAAAGAGTGGGAAAAGAGTGTAAAATCTGAAATGAAGCTCAAATTAAAGCAAAAGAAACGCAAGCCAAGGAAGAA
AGCCAAGGATGAAAGTGGTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
CGCCTCTCTCCTTTCGGCTTAGGGACACTGGGCGAGAAGGCGCCGAAGTCGATAGCTATTAGTATGTGAATTTGGGAAGCTGGCGCTCAAACTGGAGCTTCAAGGTTGAA
GATTATGGAAATTCAGCTCAAGAAGACCCCTAAATCCAAACAGCTCAACCCCAATTGGGCGCTACTCCAACAAAAGCTGAAACCCCATGGTTCAATCCACTCAAGGTCCT
CTAATGTTCCAAAATCCGACGCTTCTTCAAATAGCGTTTTAGGTAAACGCAAGGAAAGATCTGACGTGGAGTCAAATCTTTCTCAGAAGAAACTTCTCATTCCAGTGAAC
GATGACTTTAGTCTTACAGAAGTAGTAGCTATGGATTGCGAAATGGTTGGCGTGGGTCAAGGTAACAAAAGTGCCCTTGGACGAGTTACACTGGTAAACAAATGGGGAAA
TGTTATATACGATGAGTTTGTGCGCCCTATGGAGCGTGTTGTTGACTTTCGGACTCAAATTAGTGGCATAAGACCCAGCGACCTGAAGAAAGCAAAGGATTTTCCAACAG
TCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGGCATGCCTTGCGTAATGATCTTAAGGCATTGCTCTTAAGTCATCCCAAGAAGGATGTGAGAGAC
ACCTCCGAGTATCCATTCTTCCAGAAGGAAGGATGTAGAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGCATTGAGATCCAAAATGGGGAACACTGCCCTGTAGA
AGACGCTCGTTCTGCAATGCTGCTCTATCAAAAGAAGAGAAAAGAGTGGGAAAAGAGTGTAAAATCTGAAATGAAGCTCAAATTAAAGCAAAAGAAACGCAAGCCAAGGA
AGAAAGCCAAGGATGAAAGTGGTTTTGAATGATTGATTAAACTCCTAATATCTTAATTCGATTCAGATCTTACAAAAATGTGTAACTTACAGGTATAGAAGTTAGTAAAT
TGTAAGCATTTGTGGCCCCAAGTTCCATTCTTTATTATGCGATTCTTAAGTTTGTAACTCACCGTGACTAGTGGCCTGCGTTCTTGGCCAAATTTTGATCCTCAGCCTTG
AAAAGGATTACTGGTTATTAACATTTCGTATGGATACGTTAAACAAACTTTTAAACTTGAATCGTGAAAAGTGTGTAATGGAGAAGTTGATGTATGTTGAAATATGACGA
CTTTTACTTTGATG
Protein sequenceShow/hide protein sequence
MEIQLKKTPKSKQLNPNWALLQQKLKPHGSIHSRSSNVPKSDASSNSVLGKRKERSDVESNLSQKKLLIPVNDDFSLTEVVAMDCEMVGVGQGNKSALGRVTLVNKWGNV
IYDEFVRPMERVVDFRTQISGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTSEYPFFQKEGCRRALRHLAAEFLGIEIQNGEHCPVED
ARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKAKDESGFE