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Tan0015376 (gene) of Snake gourd v1 genome

Gene IDTan0015376
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:78234469..78236751
RNA-Seq ExpressionTan0015376
SyntenyTan0015376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647689.1 hypothetical protein Csa_003794 [Cucumis sativus]2.3e-0529.83Show/hide
Query:  PPATERQERKRAAASPFELCNGSEARKWCELRDLDHCNSAYLKSPASVFFPCCASHLLRFPEGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHENF
        PP               +LCN     KWC+                             +PEG FSGRD ELC PLS F+ L SSF  IPEVP AIHE F
Subjt:  PPATERQERKRAAASPFELCNGSEARKWCELRDLDHCNSAYLKSPASVFFPCCASHLLRFPEGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHENF

Query:  RGKKFYSHLALPDSRFIPFLACYLSIKLLDICSGLVILFVS-LMNISQHPSEENVRSRAEKLSNKSLVFGQISFGIRTWAL
              S +    +RF+     ++   ++ + +    L+++ L+ +      E +      L  +S+  GQISFGI  W L
Subjt:  RGKKFYSHLALPDSRFIPFLACYLSIKLLDICSGLVILFVS-LMNISQHPSEENVRSRAEKLSNKSLVFGQISFGIRTWAL
KAG6604448.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0467.39Show/hide
Query:  CASHLLRFPEGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHE
        C  HLLR  EG FSG D ELCSPLS  D LE SF SI  VP AIHE
Subjt:  CASHLLRFPEGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHE
TrEMBL top hitse value%identityAlignment
A0A0A0KI29 Uncharacterized protein2.7e-0471.79Show/hide
Query:  EGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHENF
        EG FSGRD ELC PLS F+ L SSF  IPEVP AIHE F
Subjt:  EGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSAIHENF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTAAATTAAAATCGTTAAAACGGAAGCGTCTCCACGCGCCACCTGCAACCGAGCGACAAGAGAGAAAAAGAGCAGCAGCATCACCCTTCGAACTCTGCAATGG
CTCTGAGGCTCGGAAATGGTGCGAACTGCGGGATTTGGATCACTGCAACTCCGCCTATTTGAAATCTCCCGCTTCTGTTTTTTTCCCTTGCTGTGCTTCTCATTTGCTTC
GTTTCCCAGAAGGTGGTTTTTCTGGCCGCGACGGTGAATTATGTTCTCCGTTGAGTTGCTTCGATTCGCTGGAGTCCTCCTTTTGCTCTATTCCGGAAGTTCCTTCGGCC
ATACATGAAAATTTCAGAGGTAAAAAGTTCTACAGCCATCTTGCGTTGCCTGATTCTCGTTTTATTCCTTTTCTTGCATGCTATCTATCTATCAAGCTGCTGGATATATG
TAGTGGATTGGTTATTCTGTTTGTATCACTGATGAACATTAGTCAACATCCTTCTGAGGAAAACGTCCGTTCAAGAGCTGAGAAACTTAGCAACAAAAGCTTGGTGTTTG
GACAAATTTCCTTTGGCATTAGAACTTGGGCTTTGCGAACTTATCTTCAAACTTCAGTTAGTTGTGCAACACAAATCAATTTACTTTTGGATCATACCCTGGAGCTGGAA
GTTCTAAAAGAAGAATTGGTGCTATCCATGAAGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTAAATTAAAATCGTTAAAACGGAAGCGTCTCCACGCGCCACCTGCAACCGAGCGACAAGAGAGAAAAAGAGCAGCAGCATCACCCTTCGAACTCTGCAATGG
CTCTGAGGCTCGGAAATGGTGCGAACTGCGGGATTTGGATCACTGCAACTCCGCCTATTTGAAATCTCCCGCTTCTGTTTTTTTCCCTTGCTGTGCTTCTCATTTGCTTC
GTTTCCCAGAAGGTGGTTTTTCTGGCCGCGACGGTGAATTATGTTCTCCGTTGAGTTGCTTCGATTCGCTGGAGTCCTCCTTTTGCTCTATTCCGGAAGTTCCTTCGGCC
ATACATGAAAATTTCAGAGGTAAAAAGTTCTACAGCCATCTTGCGTTGCCTGATTCTCGTTTTATTCCTTTTCTTGCATGCTATCTATCTATCAAGCTGCTGGATATATG
TAGTGGATTGGTTATTCTGTTTGTATCACTGATGAACATTAGTCAACATCCTTCTGAGGAAAACGTCCGTTCAAGAGCTGAGAAACTTAGCAACAAAAGCTTGGTGTTTG
GACAAATTTCCTTTGGCATTAGAACTTGGGCTTTGCGAACTTATCTTCAAACTTCAGTTAGTTGTGCAACACAAATCAATTTACTTTTGGATCATACCCTGGAGCTGGAA
GTTCTAAAAGAAGAATTGGTGCTATCCATGAAGTTATGA
Protein sequenceShow/hide protein sequence
MKFKLKSLKRKRLHAPPATERQERKRAAASPFELCNGSEARKWCELRDLDHCNSAYLKSPASVFFPCCASHLLRFPEGGFSGRDGELCSPLSCFDSLESSFCSIPEVPSA
IHENFRGKKFYSHLALPDSRFIPFLACYLSIKLLDICSGLVILFVSLMNISQHPSEENVRSRAEKLSNKSLVFGQISFGIRTWALRTYLQTSVSCATQINLLLDHTLELE
VLKEELVLSMKL