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Tan0015390 (gene) of Snake gourd v1 genome

Gene IDTan0015390
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionoxalate--CoA ligase-like
Genome locationLG02:29171986..29173250
RNA-Seq ExpressionTan0015390
SyntenyTan0015390
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0006631 - fatty acid metabolic process (biological process)
GO:0009698 - phenylpropanoid metabolic process (biological process)
GO:0016207 - 4-coumarate-CoA ligase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0031956 - medium-chain fatty acid-CoA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606105.1 Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1686.44Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AASQFPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVVALTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
KAG7036051.1 Oxalate--CoA ligase [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1686.44Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AASQFPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVVALTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
XP_022957813.1 oxalate--CoA ligase-like [Cucurbita moschata]7.3e-1684.75Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AASQFPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVV LTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
XP_022995200.1 oxalate--CoA ligase-like [Cucurbita maxima]5.6e-1684.75Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AAS+FPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVVALTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
XP_023534085.1 oxalate--CoA ligase-like [Cucurbita pepo subsp. pepo]2.5e-1686.44Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AASQFPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVVALTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
TrEMBL top hitse value%identityAlignment
A0A1S3AT78 oxalate--CoA ligase-like2.6e-1479.31Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVL
        AAS+FPHRRALSV+GKFDLTHE LQELIEH A+ LVD+GVN  DVVALTF NTVE V+
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVL
A0A5A7THK1 Oxalate--CoA ligase-like1.8e-1581.03Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVL
        AAS+FPHRRALSV+GKFDLTHE LQELIEH A+ LVD+GVN  DVVALTFPNTVE V+
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVL
A0A6J1DZI2 oxalate--CoA ligase-like1.3e-1377.59Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVASLV-DAGVNVSDVVALTFPNTVEKVL
        AAS+FP RRALSV+GKFDLTHE LQEL+EH ASL+ DAGVN  DVVALTF NTVE V+
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVASLV-DAGVNVSDVVALTFPNTVEKVL
A0A6J1H1B7 oxalate--CoA ligase-like3.6e-1684.75Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AASQFPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVV LTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
A0A6J1K3G7 oxalate--CoA ligase-like2.7e-1684.75Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
        AAS+FPHRRALSVAGK DLTHE LQELIEH AS LVDAGVN  DVVALTFPNTVE V+T
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVAS-LVDAGVNVSDVVALTFPNTVEKVLT
SwissProt top hitse value%identityAlignment
M4IQQ7 Probable CoA ligase CCL96.3e-1056.9Show/hide
Query:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVASLVDA-GVNVSDVVALTFPNTVEKVL
        AA++F  RRA+ V+G+F LTH  LQE+++H ASL+ A GV   DVVALTFPNT+E ++
Subjt:  AASQFPHRRALSVAGKFDLTHEGLQELIEHVASLVDA-GVNVSDVVALTFPNTVEKVL
Q9SMT7 Oxalate--CoA ligase2.5e-1161.67Show/hide
Query:  HAASQFPHRRALSVAGKFDLTHEGLQELIEHVAS--LVDAGVNVSDVVALTFPNTVEKVL
        + A +FP RRALSV+GKF+LTH  L +LIE  AS  + DAG+   DVVALTFPNTVE V+
Subjt:  HAASQFPHRRALSVAGKFDLTHEGLQELIEHVAS--LVDAGVNVSDVVALTFPNTVEKVL
Arabidopsis top hitse value%identityAlignment
AT3G48990.1 AMP-dependent synthetase and ligase family protein1.8e-1261.67Show/hide
Query:  HAASQFPHRRALSVAGKFDLTHEGLQELIEHVAS--LVDAGVNVSDVVALTFPNTVEKVL
        + A +FP RRALSV+GKF+LTH  L +LIE  AS  + DAG+   DVVALTFPNTVE V+
Subjt:  HAASQFPHRRALSVAGKFDLTHEGLQELIEHVAS--LVDAGVNVSDVVALTFPNTVEKVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCAGCATACGTCATTTCAAAACGGCAGGAGTCAAATTTGGAATGTGCAATACATGCAGCTTCTCAATTTCCTCACCGGCGGGCTCTCTCAGTCGCCGGAAAGTT
CGACCTGACACATGAGGGGTTGCAGGAGCTCATTGAACATGTCGCGAGCTTGGTGGATGCTGGTGTTAACGTCAGCGATGTGGTGGCGCTCACCTTCCCCAATACGGTTG
AGAAAGTGCTGACAAGCCCTAGGAGAAAGCTTCACACAACTTCAAGAGAAAAAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTCAGCATACGTCATTTCAAAACGGCAGGAGTCAAATTTGGAATGTGCAATACATGCAGCTTCTCAATTTCCTCACCGGCGGGCTCTCTCAGTCGCCGGAAAGTT
CGACCTGACACATGAGGGGTTGCAGGAGCTCATTGAACATGTCGCGAGCTTGGTGGATGCTGGTGTTAACGTCAGCGATGTGGTGGCGCTCACCTTCCCCAATACGGTTG
AGAAAGTGCTGACAAGCCCTAGGAGAAAGCTTCACACAACTTCAAGAGAAAAAACCTAG
Protein sequenceShow/hide protein sequence
MMSAYVISKRQESNLECAIHAASQFPHRRALSVAGKFDLTHEGLQELIEHVASLVDAGVNVSDVVALTFPNTVEKVLTSPRRKLHTTSREKT