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Tan0015428 (gene) of Snake gourd v1 genome

Gene IDTan0015428
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransport protein Sec61 subunit gamma
Genome locationLG07:3186438..3188395
RNA-Seq ExpressionTan0015428
SyntenyTan0015428
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2027914.1 unnamed protein product [Brassica napus]1.8e-0874.47Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKG  S  L +S  FLDS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
KAF5181088.1 transport protein Sec61 subunit gamma [Thalictrum thalictroides]3.1e-0871.11Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+ IDSVFDPLREFAKDSVRLVKRCHKPDRK  N  +L  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
KAG2396367.1 Protein transport protein [Vigna angularis]4.1e-0869.81Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDSSRRSRF
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRK  N  S  + L+ LD    S F
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDSSRRSRF
VDD40317.1 unnamed protein product [Brassica oleracea]1.8e-0874.47Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKG  S  L +S  FLDS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
XP_039009850.1 protein transport protein Sec61 subunit gamma [Hibiscus syriacus]5.3e-0871.11Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRK     +L  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
TrEMBL top hitse value%identityAlignment
A0A0A0LXS8 Uncharacterized protein4.9e-1555.14Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDSSRRSRFVQRLAS--------------------------QLRPQKGQAGQNRRD
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKGT             SS+RSRFVQRLAS                          QLRPQK QAGQ RR 
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDSSRRSRFVQRLAS--------------------------QLRPQKGQAGQNRRD

Query:  LVILLFQ
         +  LFQ
Subjt:  LVILLFQ
A0A0D3DFY5 Uncharacterized protein8.9e-0974.47Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKG  S  L +S  FLDS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
A0A1U8JY07 protein transport protein Sec61 subunit gamma-like2.6e-0871.11Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRK     +L  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
A0A3P6E840 Uncharacterized protein8.9e-0974.47Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKG  S  L +S  FLDS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDS
A0A7J6V8T4 Transport protein Sec61 subunit gamma1.5e-0871.11Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+ IDSVFDPLREFAKDSVRLVKRCHKPDRK  N  +L  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-12.9e-0962.22Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
P0DI75 Protein transport protein Sec61 subunit gamma-22.9e-0962.22Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
P38385 Protein transport protein Sec61 subunit gamma2.2e-0990.32Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        M+A+DSV DPLREFAKDSVRLVKRCHKPDRK
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRK
Q7Z1B8 Protein transport protein Sec61 subunit gamma3.7e-0445.45Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNF
        M+ +    +P R+FAKDS+RLVKRC KPDRK     ++  ++ F
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNF
Q9SMP2 Protein transport protein Sec61 subunit gamma-33.2e-0860Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        MEAIDS  DPLR+FAK SVRLV+RCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein2.3e-0960Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        MEAIDS  DPLR+FAK SVRLV+RCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
AT4G24920.1 secE/sec61-gamma protein transport protein2.1e-1062.22Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
AT5G50460.1 secE/sec61-gamma protein transport protein2.1e-1062.22Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRK     ++  ++ F+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCATTGATTCCGTCTTCGATCCTCTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGGTACAAACTCCAAATC
CCTTTTCATCTCTTTGAATTTTTTGGATAGTTCACGAAGGTCGCGGTTCGTACAGCGATTGGCTTCACAGCTGAGGCCACAAAAAGGGCAGGCCGGACAAAATAGAAGAG
ATCTTGTGATCCTACTGTTTCAATCCGTACTGTTAAGAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCATTGATTCCGTCTTCGATCCTCTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGGTACAAACTCCAAATC
CCTTTTCATCTCTTTGAATTTTTTGGATAGTTCACGAAGGTCGCGGTTCGTACAGCGATTGGCTTCACAGCTGAGGCCACAAAAAGGGCAGGCCGGACAAAATAGAAGAG
ATCTTGTGATCCTACTGTTTCAATCCGTACTGTTAAGAATTTAG
Protein sequenceShow/hide protein sequence
MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTNSKSLFISLNFLDSSRRSRFVQRLASQLRPQKGQAGQNRRDLVILLFQSVLLRI