; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015450 (gene) of Snake gourd v1 genome

Gene IDTan0015450
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein-like protein
Genome locationLG11:1090503..1091456
RNA-Seq ExpressionTan0015450
SyntenyTan0015450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602699.1 hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7394.34Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD+RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022134107.1 uncharacterized protein LOC111006461 [Momordica charantia]1.4e-7092.45Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDD++DD+NMIPEKNEKEVRARRKLKDLFVSSPP +D
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD RIEEQEGLLTA+N SAAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022960038.1 uncharacterized protein LOC111460905 [Cucurbita moschata]1.1e-7293.71Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEV+ARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022990769.1 uncharacterized protein LOC111487551 [Cucurbita maxima]1.9e-7293.71Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         +SD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]3.9e-7394.34Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064616.7e-7192.45Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDD++DD+NMIPEKNEKEVRARRKLKDLFVSSPP +D
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD RIEEQEGLLTA+N SAAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451192.2e-6990.62Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DK+SD RIEEQE LLT  N SAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609055.5e-7393.71Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEV+ARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        K+SD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875519.3e-7393.71Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLED

Query:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         +SD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  KLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894145.7e-7091.25Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DK+SD RIEEQE LLT  N SAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown1.2e-1943.6Show/hide
Query:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE--
        +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D     D              ++R+ RKL DLFVSSPP E  
Subjt:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE--

Query:  ------DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE
              DK +   +E +  +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  ------DKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein6.5e-1036.31Show/hide
Query:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPP
        MATL +FK L +QC VA  SPTRSP+   SP++ L RR++ TL+MLL+     R   Q                  +   + K+V A RKLKDLFVSS  
Subjt:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPP

Query:  LEDKLSDSR------IEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         E++  +         EE    + A  N+A+ +   S       P+   F  R L+RAWRP L  I E
Subjt:  LEDKLSDSR------IEEQEGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related1.8e-1540.48Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML +++   RRR   Q     P      + D N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVS

Query:  --SPPLEDKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE
          SPP + +     I E+   ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKLSDSRIEEQEGLLTATNNSAAGIGTTSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACCCGAAGCCCCACTGCTAGCCCCGTCATTCACCTCCGCCGCCGTCGTCG
TAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCTTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGATGACGACGATGACAATATGA
TTCCGGAGAAGAATGAGAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCATCGCCGCCGCTCGAGGATAAGCTTTCCGATAGTCGAATCGAAGAACAG
GAGGGATTGTTAACGGCGACTAACAACAGCGCCGCCGGAATCGGTACAACCTCCACCACTCGCCGATCCCTGAGGCCGATATCGGCGACATTCCGATACAGATTCCTCCG
GCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
TTAAATGAAAAATAATTAATTTTATTCGCTGCTGCTGTCTTCTCTCTAACTCCAAAGAGTAAAGGATCCATTCGCATCGCATCACACTTCTCACTTCTCATCCCTAATTC
AGATCTCTCCAAATTCTCACTCAACAAATTTCACTCCAAATTTAAATTCCAATTCCAATTCCAATTTTCAATTTCACAACGCAGAAATCAAGCAACCAATCTCTCAAATC
TCAATCTCAACCTCCCATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACCCGAAGCCCCACTGCTAGCCCCGTCATTCACC
TCCGCCGCCGTCGTCGTAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCTTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGATGAC
GACGATGACAATATGATTCCGGAGAAGAATGAGAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCATCGCCGCCGCTCGAGGATAAGCTTTCCGATAG
TCGAATCGAAGAACAGGAGGGATTGTTAACGGCGACTAACAACAGCGCCGCCGGAATCGGTACAACCTCCACCACTCGCCGATCCCTGAGGCCGATATCGGCGACATTCC
GATACAGATTCCTCCGGCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAGAAGATGCTCATCTCTGGTAAAATCTGTACGAAGAAATTCCCTATTTTTGCCTTA
ATTTTTTTTCCTTTTTTGATTTTCATAACATTTTTTTTCCTAATAAATTCCGACGAGTCGTATAACGCTAGGGAAGGAGAAAAAATGGAACAATGTAAATTAAAAAAAAA
CTAGAAATTAAAAAAAGAAAATACTTATTAATAAATTATTATACGAATACGATAGATGTAAATTACAATTAAAA
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLEDKLSDSRIEEQ
EGLLTATNNSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE