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Tan0015476 (gene) of Snake gourd v1 genome

Gene IDTan0015476
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG04:85922112..85922675
RNA-Seq ExpressionTan0015476
SyntenyTan0015476
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY51209.1 hypothetical protein CUMW_132530 [Citrus unshiu]4.2e-1447.52Show/hide
Query:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL
        + YVKRG    ++    + G ++P     RWR+LWR++K++KKR+F C S GT + HVPY+P TY QNFD+     +  DPD  SRSFSARFA+ S V  
Subjt:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL

Query:  K
        K
Subjt:  K

KAG6606769.1 hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3869.84Show/hide
Query:  MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIG-DDPDAISRS
        M+LSCL     GGG GYV+RG Y+AV VAVL     EKTT+RWRV+WRRLKKEKKRMF CG SG RE HVPYNP+TYLQNFD+ S MM+G DDPDAISRS
Subjt:  MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIG-DDPDAISRS

Query:  FSARFAISSSVILKRPPEFLVQKVKV
        FSARFAISS+++ + PPEF+V K+ V
Subjt:  FSARFAISSSVILKRPPEFLVQKVKV

KAG7036482.1 hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3870.97Show/hide
Query:  MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIG-DDPDAISRS
        M+LSCL     GGG GYV+RG Y+AV VAVL     EKTTARWRV+WRRLKKEKKRMF CG SG RE HVPYNP+TYLQNFD+ S MM+G DDPDAISRS
Subjt:  MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIG-DDPDAISRS

Query:  FSARFAISSSVILKRPPEFLVQKV
        FSARFAISS+++ + PPEF+V K+
Subjt:  FSARFAISSSVILKRPPEFLVQKV

KDO51221.1 hypothetical protein CISIN_1g044132mg [Citrus sinensis]9.3e-1448.51Show/hide
Query:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL
        + YVKRG    ++    + G ++P     RWR+LWR++K+EKKR+F C SSG+   HVPY+P TY QNFD+     +  DPD  SRSFSARFA+ S V  
Subjt:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL

Query:  K
        K
Subjt:  K

XP_031250243.1 uncharacterized protein LOC116108094 [Pistacia vera]1.2e-1349.48Show/hide
Query:  YVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVILK
        Y+KRG Y  + +++ G  S    T RWRVLWR++ +EKK +F C SS     H PY+P TY QNFD+   M   +DPD +SRSFSARFA+ S V  K
Subjt:  YVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVILK

TrEMBL top hitse value%identityAlignment
A0A067EJZ4 Uncharacterized protein4.5e-1448.51Show/hide
Query:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL
        + YVKRG    ++    + G ++P     RWR+LWR++K+EKKR+F C SSG+   HVPY+P TY QNFD+     +  DPD  SRSFSARFA+ S V  
Subjt:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL

Query:  K
        K
Subjt:  K

A0A2H5PFR9 Uncharacterized protein2.0e-1447.52Show/hide
Query:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL
        + YVKRG    ++    + G ++P     RWR+LWR++K++KKR+F C S GT + HVPY+P TY QNFD+     +  DPD  SRSFSARFA+ S V  
Subjt:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL

Query:  K
        K
Subjt:  K

A0A6P3YT23 uncharacterized protein LOC1074047003.8e-1346Show/hide
Query:  RGYVKRGQY-TAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVILK
        R YV+R  Y ++V+   +   S      RWR+LW ++KKEKKR+F C  S     H+PY+P TY QNFD+ S      DPD +SRSFSARFA+ S ++ K
Subjt:  RGYVKRGQY-TAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVILK

B9RQR2 Uncharacterized protein1.3e-1346.6Show/hide
Query:  YVKRGQYTAVAVA---VLGRRSPEKTTA---RWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSV
        YVK  +Y  + V+   ++G  S    TA   RWR+LWR++ KEKK++F C SS  R  H  Y+P TY QNFD+ S M    DPD++SRSFSARFA+ + +
Subjt:  YVKRGQYTAVAVA---VLGRRSPEKTTA---RWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSV

Query:  ILK
          K
Subjt:  ILK

V4ST02 Uncharacterized protein1.7e-1346.53Show/hide
Query:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL
        + YV+RG    ++    + G ++P     RWR+LWR++K+EK+R+F C SSG+   HVPY+P TY QNFD+     +  DPD  SRSFSARFA+ S V  
Subjt:  RGYVKRGQYTAVAV--AVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVIL

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGAGTTGTTTAATTAGGTGCTCCGGCGGCGGCGGGCGTGGGTACGTGAAAAGAGGGCAGTACACGGCGGTGGCAGTGGCGGTTTTGGGGCGCAGGTCGCCGGA
GAAGACGACGGCGAGATGGAGAGTTCTGTGGCGGAGGCTAAAGAAGGAGAAGAAGAGAATGTTCAGCTGCGGTTCGAGCGGAACACGTGAGGCGCACGTGCCGTATAATC
CAGAGACGTATTTGCAGAACTTCGATGAAAGCTCGGAGATGATGATCGGAGACGATCCTGACGCGATTTCTCGATCTTTCTCAGCTCGTTTCGCCATTTCTTCTTCAGTC
ATTTTGAAACGGCCGCCTGAATTTTTGGTTCAAAAGGTTAAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTTTATTTTTCTCCATTTCACATTCTTTTTAAGCTAAATAACAAATAAAGAATAAATATTACCCCCAAATTTCAAATCCCTCTGTTTTTCTCTTCAATGGATTTGAGTTG
TTTAATTAGGTGCTCCGGCGGCGGCGGGCGTGGGTACGTGAAAAGAGGGCAGTACACGGCGGTGGCAGTGGCGGTTTTGGGGCGCAGGTCGCCGGAGAAGACGACGGCGA
GATGGAGAGTTCTGTGGCGGAGGCTAAAGAAGGAGAAGAAGAGAATGTTCAGCTGCGGTTCGAGCGGAACACGTGAGGCGCACGTGCCGTATAATCCAGAGACGTATTTG
CAGAACTTCGATGAAAGCTCGGAGATGATGATCGGAGACGATCCTGACGCGATTTCTCGATCTTTCTCAGCTCGTTTCGCCATTTCTTCTTCAGTCATTTTGAAACGGCC
GCCTGAATTTTTGGTTCAAAAGGTTAAAGTTTAGTGAATTTGTTCTTCAAAAGAAGTTTGTGTTAATTACAGACTCTGTTTATAAATGTCAGAAATCAGAATGGTTTCTT
TTTTTCCTTTCTCC
Protein sequenceShow/hide protein sequence
MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSV
ILKRPPEFLVQKVKV