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Tan0015480 (gene) of Snake gourd v1 genome

Gene IDTan0015480
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAlba domain-containing protein
Genome locationLG08:3776041..3777214
RNA-Seq ExpressionTan0015480
SyntenyTan0015480
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]1.0e-5187.33Show/hide
Query:  ATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        LGKSEKFDSLMTAA   PE  V        AVA AA  EEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]1.2e-5287.42Show/hide
Query:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        VLGKSEKFDSLMTAA   PE  V        AVA AAG EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

XP_022143158.1 uncharacterized protein At2g34160 [Momordica charantia]4.6e-5286.49Show/hide
Query:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTAA-ATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEE
        KSEKFDSLMTAA A APEAA                 EEKKAEESKE+
Subjt:  KSEKFDSLMTAA-ATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEE

XP_022946134.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata]1.7e-5181.88Show/hide
Query:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG            ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAA T PE AV        A  VAA  EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

XP_022999100.1 uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]1.7e-5182.21Show/hide
Query:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG            ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAV--EAEVEAEAAVAVA-AGGEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAA   PEAAV   A V A A V  A A  EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAV--EAEVEAEAAVAVA-AGGEEKKAEESKEEQ

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein5.0e-5287.33Show/hide
Query:  ATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        LGKSEKFDSLMTAA   PE  V        AVA AA  EEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

A0A1S3C2U1 uncharacterized protein At2g341605.9e-5387.42Show/hide
Query:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        VLGKSEKFDSLMTAA   PE  V        AVA AAG EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein5.9e-5387.42Show/hide
Query:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ
        VLGKSEKFDSLMTAA   PE  V        AVA AAG EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ

A0A6J1CQ10 uncharacterized protein At2g341602.2e-5286.49Show/hide
Query:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
        MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG
Subjt:  MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLG

Query:  KSEKFDSLMTAA-ATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEE
        KSEKFDSLMTAA A APEAA                 EEKKAEESKE+
Subjt:  KSEKFDSLMTAA-ATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEE

A0A6J1KEC8 uncharacterized protein At2g34160 isoform X18.5e-5282.21Show/hide
Query:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG            ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG------------ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAV--EAEVEAEAAVAVA-AGGEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAA   PEAAV   A V A A V  A A  EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAAATAPEAAV--EAEVEAEAAVAVA-AGGEEKKAEESKEEQ

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.5e-3774.36Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAAATAPEAAVEAEVE
        M AA    E A EA+V+
Subjt:  MTAAATAPEAAVEAEVE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein3.6e-3974.78Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAAATAPEAAVEAE
        M AA    EAA   E
Subjt:  MTAAATAPEAAVEAE

AT2G34160.1 Alba DNA/RNA-binding protein1.8e-3874.36Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAAATAPEAAVEAEVE
        M AA    E A EA+V+
Subjt:  MTAAATAPEAAVEAEVE

AT3G04620.1 Alba DNA/RNA-binding protein3.4e-4574.29Show/hide
Query:  ATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK
        AT   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  ATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTAAATA----PEAAVEAEVEAEAAVAVAAGGE
        S+KFDSL+           EA+ E E   EA   VAA  E
Subjt:  SEKFDSLMTAAATA----PEAAVEAEVEAEAAVAVAAGGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTA
CATTCAACAACACAATGAGGTTGAGCTTTCTGCTTTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAAATTCTAAAGAACAATGGACTGGCTACAGAGAAGAAAG
TTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACT
GCGGCCGCAACTGCGCCAGAGGCGGCGGTCGAGGCGGAGGTGGAGGCGGAGGCGGCGGTAGCGGTGGCAGCTGGTGGTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGA
GCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGATTGCAGTATCGGGAGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCCAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTA
CATTCAACAACACAATGAGGTTGAGCTTTCTGCTTTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAAATTCTAAAGAACAATGGACTGGCTACAGAGAAGAAAG
TTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAATTTGATTCTCTGATGACT
GCGGCCGCAACTGCGCCAGAGGCGGCGGTCGAGGCGGAGGTGGAGGCGGAGGCGGCGGTAGCGGTGGCAGCTGGTGGTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGA
GCAGTAG
Protein sequenceShow/hide protein sequence
MATIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMT
AAATAPEAAVEAEVEAEAAVAVAAGGEEKKAEESKEEQ