; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015507 (gene) of Snake gourd v1 genome

Gene IDTan0015507
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-H2 finger protein ATL8
Genome locationLG08:74213920..74214486
RNA-Seq ExpressionTan0015507
SyntenyTan0015507
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596287.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]2.5e-8786.08Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY + LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG   NQASANRGLKKKILQSLPKF Y+ASGS GE 
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG HN EEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

XP_022933605.1 RING-H2 finger protein ATL8 [Cucurbita moschata]1.9e-8786.08Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY + LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG   NQASANRGLKKKILQSLPKF Y+ASGS GE 
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG HN+EEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

XP_022971423.1 RING-H2 finger protein ATL8 [Cucurbita maxima]3.9e-8886.6Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY++ LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG   NQASANRGLKKKILQSLPKF Y+ASGS GEG
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVVHG  HNNEEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]7.8e-8987.11Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY + LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG   G   NQASANRGLKKKILQSLPKFTY+ASGS GEG
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG HNNEEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

XP_038904164.1 RING-H2 finger protein ATL80-like [Benincasa hispida]1.9e-7984.13Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC
        MTRY+R LA NTS   APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGGG+  NQASANRGLKKKILQSLPKF YK++G  GEGK AAEC
Subjt:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC

Query:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGG-AHNNEEEQKRREDNNANNTGLGFLP
        AICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV GG AHNNEE +        NN GLGFLP
Subjt:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGG-AHNNEEEQKRREDNNANNTGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein6.3e-7682.11Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC
        M+ Y+R L ANTS  SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG     NQASANRGLKKKILQSLPKF YK+  + G+GK AAEC
Subjt:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC

Query:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVH-GGAHNNEEEQ-KRREDNNANNTGLGFLP
        AICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA V  GGAHNNEEE+ +   +NN NN GLGFLP
Subjt:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVH-GGAHNNEEEQ-KRREDNNANNTGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL801.3e-7682.45Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC
        M+ Y+R L ANTS  SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG     NQASANRGLKKKILQSLPKF YK+  + G+GK AAEC
Subjt:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC

Query:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        AICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV GGA +N EE++  EDNN +N GLGFLP
Subjt:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL801.3e-7682.45Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC
        M+ Y+R L ANTS  SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG     NQASANRGLKKKILQSLPKF YK+  + G+GK AAEC
Subjt:  MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAEC

Query:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        AICLAEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV GGA +N EE++  EDNN +N GLGFLP
Subjt:  AICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL89.3e-8886.08Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY + LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG   NQASANRGLKKKILQSLPKF Y+ASGS GE 
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVVHGG HN+EEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL81.9e-8886.6Show/hide
Query:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG
        MTRY++ LA NTSS    A+APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG   NQASANRGLKKKILQSLPKF Y+ASGS GEG
Subjt:  MTRYMRVLAANTSS----ASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGATANQASANRGLKKKILQSLPKFTYKASGSSGEG

Query:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP
        KFAAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVVHG  HNNEEEQKRREDNN NN GLGFLP
Subjt:  KFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.8e-4050.25Show/hide
Query:  MTRYMRVLAANTSSASAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKA----SGSSG
        MTR  R+L       +APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR   A  +  S N+GLKKK LQSLP+ T+ A    SG++ 
Subjt:  MTRYMRVLAANTSSASAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKA----SGSSG

Query:  EGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGL-GFLP
        E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG      H      +++  R + +  ++T +  FLP
Subjt:  EGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGL-GFLP

Q8LC69 RING-H2 finger protein ATL82.1e-4456.42Show/hide
Query:  AANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQ-------ASANRGLKKKILQSLPKFTYKASGSSGEGKFAAECA
        A +TS A A PP      SD V+ILA LLCAL C++GLIAV+RCAWLRR      +        A+AN+GLKKK+L+SLPK TY  S  S   +   ECA
Subjt:  AANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQ-------ASANRGLKKKILQSLPKFTYKASGSSGEGKFAAECA

Query:  ICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNAN
        ICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G    +   K+RED   N
Subjt:  ICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNAN

Q9LM69 RING-H2 finger protein ATL802.2e-4657.22Show/hide
Query:  RVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--GGGATAN----------QASANRGLKKKILQSLPKFTYKASGSSGE
        R+L  + + + A      AL SD VVILAALLCALIC++GLIAV+RC WLRR   G  T +           A+AN+GLKKK+LQSLPK T+  S  S E
Subjt:  RVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--GGGATAN----------QASANRGLKKKILQSLPKFTYKASGSSGE

Query:  GKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKR
         +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P     G  +  E + R
Subjt:  GKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKR

Q9LZV8 RING-H2 finger protein ATL742.8e-2552.38Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAA-ECAICLAEFMEGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA +R G G    A A   +   GLKK+ L+  P   Y     SGE K AA ECAICL EF +GE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAA-ECAICLAEFMEGEEIRQLPQCG

Query:  HCFHVSCVDTWLGSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLGSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL451.3e-4155.56Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSS----
        MTR  R L     +AS PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    A       N+GLKKK LQ+LPK TY AS S+    
Subjt:  MTRYMRVLAANTSSASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSS----

Query:  --------GEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCG
                G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG
Subjt:  --------GEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCG

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein1.6e-4757.22Show/hide
Query:  RVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--GGGATAN----------QASANRGLKKKILQSLPKFTYKASGSSGE
        R+L  + + + A      AL SD VVILAALLCALIC++GLIAV+RC WLRR   G  T +           A+AN+GLKKK+LQSLPK T+  S  S E
Subjt:  RVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR--GGGATAN----------QASANRGLKKKILQSLPKFTYKASGSSGE

Query:  GKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKR
         +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P     G  +  E + R
Subjt:  GKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKR

AT1G76410.1 RING/U-box superfamily protein1.5e-4556.42Show/hide
Query:  AANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQ-------ASANRGLKKKILQSLPKFTYKASGSSGEGKFAAECA
        A +TS A A PP      SD V+ILA LLCAL C++GLIAV+RCAWLRR      +        A+AN+GLKKK+L+SLPK TY  S  S   +   ECA
Subjt:  AANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQ-------ASANRGLKKKILQSLPKFTYKASGSSGEGKFAAECA

Query:  ICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNAN
        ICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G    +   K+RED   N
Subjt:  ICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNAN

AT2G17450.1 RING-H2 finger A3A1.3e-4150.25Show/hide
Query:  MTRYMRVLAANTSSASAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKA----SGSSG
        MTR  R+L       +APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR   A  +  S N+GLKKK LQSLP+ T+ A    SG++ 
Subjt:  MTRYMRVLAANTSSASAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKA----SGSSG

Query:  EGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGL-GFLP
        E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG      H      +++  R + +  ++T +  FLP
Subjt:  EGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGL-GFLP

AT4G35480.1 RING-H2 finger A3B9.0e-4355.56Show/hide
Query:  MTRYMRVLAANTSSASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSS----
        MTR  R L     +AS PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    A       N+GLKKK LQ+LPK TY AS S+    
Subjt:  MTRYMRVLAANTSSASAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSS----

Query:  --------GEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCG
                G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG
Subjt:  --------GEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCG

AT5G01880.1 RING/U-box superfamily protein2.0e-2652.38Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAA-ECAICLAEFMEGEEIRQLPQCG
        +++ V+ILAALLCALI  +GL ++ RCA +R G G    A A   +   GLKK+ L+  P   Y     SGE K AA ECAICL EF +GE +R LP C 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----ATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAA-ECAICLAEFMEGEEIRQLPQCG

Query:  HCFHVSCVDTWLGSHSSCPSCRQILV
        H FH+SC+DTWL SHSSCP+CR  L+
Subjt:  HCFHVSCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTATATGAGAGTTCTCGCCGCGAATACTTCGTCGGCGTCGGCACCTCCCCCTGAGGCTGTGGCCTTGGAGTCGGATTTCGTGGTGATTCTGGCGGCGCTTCT
GTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGATGTGCGTGGCTCCGCCGTGGCGGTGGGGCTACGGCGAATCAAGCGTCTGCGAATAGGGGATTGAAGA
AGAAGATCCTGCAATCCCTTCCGAAATTCACGTACAAAGCGTCAGGGTCGAGCGGAGAAGGGAAATTCGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGG
GAGGAGATCCGGCAGCTGCCGCAGTGCGGCCATTGTTTCCACGTCAGCTGCGTAGACACGTGGCTGGGTTCACACTCATCCTGCCCCTCTTGCCGGCAGATTCTGGTGGT
GGCCAGATGCCAGAAGTGCGGCCAGTTTCCGGCCGTCGTCCACGGCGGCGCTCACAACAACGAGGAGGAGCAAAAGAGGAGGGAAGATAACAATGCTAACAACACGGGTT
TGGGATTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTATATGAGAGTTCTCGCCGCGAATACTTCGTCGGCGTCGGCACCTCCCCCTGAGGCTGTGGCCTTGGAGTCGGATTTCGTGGTGATTCTGGCGGCGCTTCT
GTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGATGTGCGTGGCTCCGCCGTGGCGGTGGGGCTACGGCGAATCAAGCGTCTGCGAATAGGGGATTGAAGA
AGAAGATCCTGCAATCCCTTCCGAAATTCACGTACAAAGCGTCAGGGTCGAGCGGAGAAGGGAAATTCGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGG
GAGGAGATCCGGCAGCTGCCGCAGTGCGGCCATTGTTTCCACGTCAGCTGCGTAGACACGTGGCTGGGTTCACACTCATCCTGCCCCTCTTGCCGGCAGATTCTGGTGGT
GGCCAGATGCCAGAAGTGCGGCCAGTTTCCGGCCGTCGTCCACGGCGGCGCTCACAACAACGAGGAGGAGCAAAAGAGGAGGGAAGATAACAATGCTAACAACACGGGTT
TGGGATTTTTGCCTTGA
Protein sequenceShow/hide protein sequence
MTRYMRVLAANTSSASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGATANQASANRGLKKKILQSLPKFTYKASGSSGEGKFAAECAICLAEFMEG
EEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVHGGAHNNEEEQKRREDNNANNTGLGFLP