CuGenDBv2

Gene ID	Tan0015522
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DUF4219 domain-containing protein
Genome location	LG08:8711877..8712303
RNA-Seq Expression	Tan0015522
Synteny	Tan0015522
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0016310 - phosphorylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	IPR025314 - Domain of unknown function DUF4219

Homology

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GenBank top hits

e value

%identity

Alignment

AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]

1.5e-32

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

PKU71906.1 hypothetical protein MA16_Dca021744 [Dendrobium catenatum]

5.6e-35

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASN M+PFQVP LN SNYDNWSIKMKALLG QD+WE++EKG+ EP+++ SLSQ Q+DSLRDSRKRDKKALYLI+QGLDDD+FEKI +AK+AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

XP_020688719.2 uncharacterized protein LOC110104092 [Dendrobium catenatum]

2.5e-35

76.84

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASN M+PFQVP LN SNYDNWSIKMKALLG+QD+WE++EKG+ EP+++ SLSQ Q+DSLRDSRKRDKKALYLI+QGLDDD+FEK+S+ K+AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

XP_028216659.1 uncharacterized protein LOC114398694 [Glycine soja]

8.9e-33

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        M S++MVPFQVP+LN +NYDNWSI MKALLG QD+ EIVEKGH+E EN  SLSQ QRDSLRDSRKRDKKALYLIYQGL+DDAFEK+ +AK+ KEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

XP_028556025.1 uncharacterized protein LOC110109975 [Dendrobium catenatum]

3.9e-36

78.95

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASN M+PFQVP LN SNYDNWSIKMKALLG+QD+WE++EKG++EP+++ SLSQ Q+DSLRDSRKRDKKALYLI+QGLDDD+FEKIS+AK+AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

TrEMBL top hits

e value

%identity

Alignment

A0A2I0W8B3 DUF4219 domain-containing protein

2.7e-35

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASN M+PFQVP LN SNYDNWSIKMKALLG QD+WE++EKG+ EP+++ SLSQ Q+DSLRDSRKRDKKALYLI+QGLDDD+FEKI +AK+AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

Q9C536 Copia-type polyprotein, putative

7.4e-33

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

Q9C739 Copia-type polyprotein, putative

7.4e-33

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

Q9M2D1 Copia-type polyprotein

7.4e-33

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

Q9SXB2 T28P6.8 protein

7.4e-33

77.89

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AKEA
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48720.1 unknown protein

9.2e-36

76.6

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Query:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKE
        MASNN VPFQVPVL KSNYDNWS++MKA+LG+ D+WEIVEKG  EPEN+GSLSQ Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA +AK+
Subjt:  MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKE

Sequences

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CDS sequence

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mRNA sequence

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ATGGCAAGTAACAACATGGTCCCGTTCCAAGTCCCAGTGCTCAACAAGAGCAACTACGATAATTGGAGCATCAAGATGAAGGCTCTCCTTGGATCACAAGATATGTGGGA
GATAGTAGAGAAAGGGCACTCTGAGCCGGAGAATGATGGTAGTCTTTCTCAAATACAAAGGGATAGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAA
TCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACGGCGAAAGAAGCATGAGAGAAGCTTCAAATATCGTACAAGGGAGCGGATCCAGTAAAA
AAGGTACGTCTTCAAACTCTAAGAGCTGAGTTTGAAACTTTGCATATGAAAGAAGGGGAAGTCATCTCAGATTACTTCTCTAGAGTTTTAACAGTCA

Protein sequence

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MASNNMVPFQVPVLNKSNYDNWSIKMKALLGSQDMWEIVEKGHSEPENDGSLSQIQRDSLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEA

Tan0015522 (gene) of Snake gourd v1 genome