CuGenDBv2

Gene ID	Tan0015529
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Rab5-interacting
Genome location	LG01:30438861..30441059
RNA-Seq Expression	Tan0015529
Synteny	Tan0015529
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

8.5e-63

92.91

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVIS+ MIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

1.7e-63

96.06

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVIS+ M+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

3.8e-63

95.28

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVIS+ M+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895583.1 respirasome Complex Assembly Factor 1-like isoform X1 [Benincasa hispida]

3.6e-61

86.96

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIL-----------FLVISSAMIYGYYAMIL
        MKDGKS KVNSQLQHQNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFIL           FLVIS+ M+YGYYAMIL
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIL-----------FLVISSAMIYGYYAMIL

Query:  KVDEEEFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF
        KVDEEEFGGHGVLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  KVDEEEFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

1.0e-63

94.49

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVIS+ M+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

1.7e-61

93.7

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQ QNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVIS+ MIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

4.1e-63

92.91

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVIS+ MIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A5A7VQ84 Rab5-interacting

3.7e-56

87.4

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVIS+ MIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLL   L   L  F
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

8.3e-64

96.06

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVIS+ M+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

1.8e-63

95.28

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVIS+ M+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.1e-15

35.43

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I++ ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

3.9e-18

36.72

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Query:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I++ ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

4.3e-49

67.67

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Query:  MKDGKSNKVNS------QLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEE
        MK+GKS+K +S      Q+ HQN HL  F  AKLFD EASWDKDQLGDVLHW+RQ V L+CGLLWG++PLVGGIW +LFL ISS ++YGYYA++LK+DEE
Subjt:  MKDGKSNKVNS------QLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W LVYSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF

AT5G59410.1 Rab5-interacting family protein

3.2e-52

75.38

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Query:  MKDGKSNKVN---SQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KLAKLFDP+ASWDKDQLGDVLHW+RQ V L+ GLLWGS+PLVGGIW ILFL ISS ++YGYYAMILKVDEE+FG
Subjt:  MKDGKSNKVN---SQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF
        GH  LLQEGLFAS+TLFLL W LVYSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF

Sequences

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CDS sequence

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ATGAAGGACGGGAAGTCGAATAAGGTCAATTCTCAGTTGCAGCACCAGAATGGTCACTTGCCGCCGTTCAAATTGGCCAAATTGTTCGATCCAGAGGCTTCATGGGATAA
GGATCAACTAGGAGATGTCTTGCATTGGATGAGACAATCAGTTGCGCTTGTATGTGGGCTGCTTTGGGGTTCAGTACCTCTGGTTGGAGGAATTTGGTTCATCTTGTTTT
TGGTGATATCATCCGCGATGATATACGGATACTATGCAATGATTTTGAAAGTAGACGAAGAAGAATTTGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTTTTTGCTTCC
ATAACTCTGTTTCTGCTTATGTGGACTCTCGTTTACAGCTTGGGACATTTCTGA

mRNA sequence

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GCAAAAGTTCTTCACGTTTTAGAGAGAGATTTTGCTGACCAAGAAATTTTCATAAAACTACAATTTCCCACTTCAGATTGAAATCGATTTCATCAAATTTTTATAAGAAC
AAATCCAAAGAGATCGACAGAAAGCCGTCTCCTGAATTTGTTTATTCCATTTCCCCACTTTCATGCCGTTCTTGTTTTTCCAAAACCCTAGCATCTTCTGATCTTCCCTC
TAGATTTCAGTCCACACTCCACTGGGTCTCTCGAATTTTTCCCTAATTTTCGATTTCCGATCAGTCGGCATGAAGGACGGGAAGTCGAATAAGGTCAATTCTCAGTTGCA
GCACCAGAATGGTCACTTGCCGCCGTTCAAATTGGCCAAATTGTTCGATCCAGAGGCTTCATGGGATAAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAATCAG
TTGCGCTTGTATGTGGGCTGCTTTGGGGTTCAGTACCTCTGGTTGGAGGAATTTGGTTCATCTTGTTTTTGGTGATATCATCCGCGATGATATACGGATACTATGCAATG
ATTTTGAAAGTAGACGAAGAAGAATTTGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTTTTTGCTTCCATAACTCTGTTTCTGCTTATGTGGACTCTCGTTTACAGCTT
GGGACATTTCTGATGATGGTTTTGTCATCGTTCTCGATATCGAGCGAAGCAATGGAACATGGAAGGGATGTTGGCCGCCATTGTTGCTTGCTTTTTGATTAGTGATTGTG
CAATAGCTTGCTGTTAAGGAGTAAAACGCTCTTAGAAGTTTCCACGATTTAGAAGTGGATTAATTTCATTAGAATTACAACTAACCAAATTTTAGTTGTTATTATTTATT
CTGTTAAATCCAATTCAATCTTCTTAAAAGAATAAATTCTTCAAACAAATGCAGTCCAGTGCATGTTTTCTTTTACCGTTTATTATTGCTACATTGGGTTAACGTTTAAG
AATATGGTTCG

Protein sequence

Show/hide protein sequence

MKDGKSNKVNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISSAMIYGYYAMILKVDEEEFGGHGVLLQEGLFAS
ITLFLLMWTLVYSLGHF

Tan0015529 (gene) of Snake gourd v1 genome