; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015537 (gene) of Snake gourd v1 genome

Gene IDTan0015537
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG11:32993113..32993886
RNA-Seq ExpressionTan0015537
SyntenyTan0015537
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]4.9e-11882.88Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ++LGIQIV NRKNKTLA+SQ SYIDKVLSR+KMQ+SKKG LPF+H +HLSKEQCPKTPQEVEDM+ IPY+ AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VK ILKYL RT NYMLVYGAKDLI TGYTDSDFQ+DKD RKSTSGSVFTLN GAVVWRS+KQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIVH
        VWLRKF+ DLE+VPNM L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIVH
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIVH

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKI+LKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]6.0e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMY MLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKIILKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKI+LKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]8.4e-11883.98Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H TTVKIILKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLNEGAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

TrEMBL top hitse value%identityAlignment
A0A5A7TKM4 Gag/pol protein2.9e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMY MLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKIILKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

A0A5A7TZD0 Gag/pol protein1.3e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKI+LKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

A0A5A7UYE8 Gag/pol protein1.3e-11682.81Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VKI+LKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLN GAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

A0A5A7V1F5 Gag/pol protein4.1e-11883.98Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ+VLGIQI+ +RKNKTLALSQ +YIDK+L R+ MQ+SKKGLLPF+H VHLSKEQ PKTPQEVEDM+RIPYA AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H TTVKIILKYL RT +YMLVYGAKDLI TGYTDSDFQTDKD RKSTSGSVFTLNEGAVVWRSIKQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        VWLRKF+ DLE+VPNM+L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIV
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

E2GK51 Gag/pol protein (Fragment)2.4e-11882.88Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LGEAQ++LGIQIV NRKNKTLA+SQ SYIDKVLSR+KMQ+SKKG LPF+H +HLSKEQCPKTPQEVEDM+ IPY+ AVGSLMYAMLCTRPDIC+ VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSRYQSNPG +H T VK ILKYL RT NYMLVYGAKDLI TGYTDSDFQ+DKD RKSTSGSVFTLN GAVVWRS+KQ CIADSTMEAEYVAACEA KEA
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIVH
        VWLRKF+ DLE+VPNM L I LYCDNS A+ANS+EPR+HKRGKHIE+KYHLIREIVH
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIVH

SwissProt top hitse value%identityAlignment
P04146 Copia protein9.5e-3234.72Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLP----FKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDIC
        M  L E +  +GI+I    +   + LSQ++Y+ K+LS+F M++      P      +E+  S E C             P    +G LMY MLCTRPD+ 
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLP----FKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDIC

Query:  FVVGMVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIF----TGYTDSDFQTDKDLRKSTSGSVFTLNE-GAVVWRSIKQECIADSTMEAEYV
          V ++SRY S   SE    +K +L+YL  T++  L++  K+L F     GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EAEY+
Subjt:  FVVGMVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIF----TGYTDSDFQTDKDLRKSTSGSVFTLNE-GAVVWRSIKQECIADSTMEAEYV

Query:  AACEATKEAVWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        A  EA +EA+WL+  +  + I   +   I +Y DN   ++ +  P  HKR KHI+ KYH  RE V
Subjt:  AACEATKEAVWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

P0CV72 Secreted RxLR effector protein 1611.0e-2546.67Show/hide
Query:  MKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVY---GAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNE
        MK +PY  AVG++MY M+ TRPD+   VG++S++ S+P   H   +K +L+YL  T  Y L +   G   L+  GY+D+D+  D + R+STSG +F LN 
Subjt:  MKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVY---GAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNE

Query:  GAVVWRSIKQECIADSTMEAEYVAACEATKEAVWL
        G V WRS KQ  +A S+ E EY+A  EAT+EAVWL
Subjt:  GAVVWRSIKQECIADSTMEAEYVAACEATKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-6047.27Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        MK LG AQ +LG++IV  R ++ L LSQ  YI++VL RF M+++K    P    + LSK+ CP T +E  +M ++PY+ AVGSLMYAM+CTRPDI   VG
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA
        +VSR+  NPG EH   VK IL+YL  T    L +G  D I  GYTD+D   D D RKS++G +FT + GA+ W+S  Q+C+A ST EAEY+AA E  KE 
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEA

Query:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
        +WL++F+ +L +        ++YCD+ +A+  S+    H R KHI+ +YH IRE+V
Subjt:  VWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.8e-2232.94Show/hide
Query:  EAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRY
        E  + LGI+    R    L LSQ  YI  +L+R  M  +K    P      LS     K     E      Y   VGSL Y +  TRPDI + V  +S++
Subjt:  EAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRY

Query:  QSNPGSEHSTTVKIILKYLWRTMNY-MLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEAVWLR
           P  EH   +K IL+YL  T N+ + +     L    Y+D+D+  DKD   ST+G +  L    + W S KQ+ +  S+ EAEY +    + E  W+ 
Subjt:  QSNPGSEHSTTVKIILKYLWRTMNY-MLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEAVWLR

Query:  KFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
          + +L I   ++   ++YCDN  A      P  H R KHI   YH IR  V
Subjt:  KFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-2130.95Show/hide
Query:  EAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRY
        +  + LGI+    R  + L LSQ  Y   +L+R  M  +K    P      L+     K P   E      Y   VGSL Y +  TRPD+ + V  +S+Y
Subjt:  EAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRY

Query:  QSNPGSEHSTTVKIILKYLWRTMNY-MLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEAVWLR
           P  +H   +K +L+YL  T ++ + +     L    Y+D+D+  D D   ST+G +  L    + W S KQ+ +  S+ EAEY +    + E  W+ 
Subjt:  QSNPGSEHSTTVKIILKYLWRTMNY-MLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEAVWLR

Query:  KFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV
          + +L I   +S   ++YCDN  A      P  H R KHI   YH IR  V
Subjt:  KFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.9e-2530.98Show/hide
Query:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG
        ++ LG  ++ LG++I   R    + + Q  Y   +L    +   K   +P    V  S      +  +  D K   Y   +G LMY  + TR DI F V 
Subjt:  MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVG

Query:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAK-DLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKE
         +S++   P   H   V  IL Y+  T+   L Y ++ ++    ++D+ FQ+ KD R+ST+G    L    + W+S KQ+ ++ S+ EAEY A   AT E
Subjt:  MVSRYQSNPGSEHSTTVKIILKYLWRTMNYMLVYGAK-DLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKE

Query:  AVWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIRE
         +WL +F  +L++   +S   +L+CDN+AA+  +     H+R KHIE   H +RE
Subjt:  AVWLRKFMMDLEIVPNMSLSIILYCDNSAAMANSREPRNHKRGKHIEQKYHLIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTTTGGGAGAGGCGCAGTTTGTTCTTGGAATCCAGATTGTCTGGAATCGCAAAAACAAAACTCTAGCATTGTCTCAAACATCTTATATCGACAAAGTGTTGTC
AAGATTTAAGATGCAAGATTCCAAGAAAGGTTTATTACCTTTCAAGCATGAAGTTCATTTGTCTAAGGAACAATGTCCGAAGACGCCTCAAGAAGTTGAGGATATGAAAC
GAATTCCTTATGCATTAGCTGTTGGTAGCCTGATGTACGCAATGTTGTGTACTAGGCCAGACATATGCTTTGTAGTAGGAATGGTCAGTAGATATCAATCTAATCCAGGA
TCAGAACACTCGACAACGGTTAAGATAATCCTCAAGTATCTTTGGAGAACAATGAACTACATGCTTGTTTATGGAGCTAAGGATTTGATCTTTACAGGATACACAGATTC
CGACTTCCAAACTGACAAAGATTTGAGGAAATCTACGTCAGGGTCAGTTTTCACTCTTAACGAAGGGGCTGTAGTTTGGCGAAGCATCAAGCAAGAATGCATCGCAGATT
CAACTATGGAAGCCGAATATGTAGCAGCTTGTGAAGCAACTAAAGAAGCCGTATGGCTAAGGAAATTCATGATGGATTTGGAAATTGTTCCAAACATGAGTTTGTCAATC
ATACTTTATTGTGATAACAGTGCTGCTATGGCAAATTCAAGAGAACCCCGAAATCACAAGCGGGGTAAACACATTGAGCAAAAGTATCACCTAATCAGGGAGATAGTGCA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTTTGGGAGAGGCGCAGTTTGTTCTTGGAATCCAGATTGTCTGGAATCGCAAAAACAAAACTCTAGCATTGTCTCAAACATCTTATATCGACAAAGTGTTGTC
AAGATTTAAGATGCAAGATTCCAAGAAAGGTTTATTACCTTTCAAGCATGAAGTTCATTTGTCTAAGGAACAATGTCCGAAGACGCCTCAAGAAGTTGAGGATATGAAAC
GAATTCCTTATGCATTAGCTGTTGGTAGCCTGATGTACGCAATGTTGTGTACTAGGCCAGACATATGCTTTGTAGTAGGAATGGTCAGTAGATATCAATCTAATCCAGGA
TCAGAACACTCGACAACGGTTAAGATAATCCTCAAGTATCTTTGGAGAACAATGAACTACATGCTTGTTTATGGAGCTAAGGATTTGATCTTTACAGGATACACAGATTC
CGACTTCCAAACTGACAAAGATTTGAGGAAATCTACGTCAGGGTCAGTTTTCACTCTTAACGAAGGGGCTGTAGTTTGGCGAAGCATCAAGCAAGAATGCATCGCAGATT
CAACTATGGAAGCCGAATATGTAGCAGCTTGTGAAGCAACTAAAGAAGCCGTATGGCTAAGGAAATTCATGATGGATTTGGAAATTGTTCCAAACATGAGTTTGTCAATC
ATACTTTATTGTGATAACAGTGCTGCTATGGCAAATTCAAGAGAACCCCGAAATCACAAGCGGGGTAAACACATTGAGCAAAAGTATCACCTAATCAGGGAGATAGTGCA
TTGA
Protein sequenceShow/hide protein sequence
MKILGEAQFVLGIQIVWNRKNKTLALSQTSYIDKVLSRFKMQDSKKGLLPFKHEVHLSKEQCPKTPQEVEDMKRIPYALAVGSLMYAMLCTRPDICFVVGMVSRYQSNPG
SEHSTTVKIILKYLWRTMNYMLVYGAKDLIFTGYTDSDFQTDKDLRKSTSGSVFTLNEGAVVWRSIKQECIADSTMEAEYVAACEATKEAVWLRKFMMDLEIVPNMSLSI
ILYCDNSAAMANSREPRNHKRGKHIEQKYHLIREIVH