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Tan0015543 (gene) of Snake gourd v1 genome

Gene IDTan0015543
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:8868191..8872802
RNA-Seq ExpressionTan0015543
SyntenyTan0015543
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTGGGTACACCGATGGCTACTTCTCCGACATCCTCTGCGAAAACAGGAACAGAGGGATCCCCGTCGCCGATCAGCGTTGATGGGATCTCCAAGTCACCGGCGCC
GGTTACGAAAATTGCATTAATGGACGTCTCTCCATTATTGCAGACAAGCGAAAAATCAAGGACGGTGATTGAAGGGATTTCGGAGAGGGAGAGCATTAAATGTGCCAGGC
GCTTAAATTTTGGGGAGGATCTCGCGGAGAAGACGGTGAACACGCGAGGATTTGGGGAAGAGGATTCGGTTAAGGAAGATGGGTTGTTGGGCCAAGGGAATGGAGATGGG
CCGGTACTAGGGGGCATTTCAATCGCGGGCCTCTTGCATGCCAGTGGGCTGGAAAACACTGTGGGTCTGTCTGTGCATAAGGAAGAAACAGGTTTAGGCAACCCCTTCAC
AGTCTCGATGGTGGGCCAAAACGAGGTTGGGCCTGGTAATCAATTGGCTGAAATTTCAAATCCGAGCTCGACCTTCAAAATTAAACCTTCACGATGGCATAGGCAGTCCA
GAGAACAGTCACAAGTGAAATCGAAGACTGATAAAGCTGAGGAGAAAAAGAGGAAGGGGGAAGCACTCATTGAGCCAAATAGCAAGAAACTAAATGGAGTTACAAAACAC
GATAAGGCGGATGAACGTGAAATTATGTTGGCGGCGAATATGAGCAACAAAGAGACGGGCAATACAAGGGCAGGTGGAAGTGTAGGCAGAAATGAGGATATAGGGGTGAA
TGTTTTCGTGGATGCAGCGTGTGATGAGTCTAAAGGGCGAACATGTGTTGGGGTTGCTGTTCGTGATCCAAATGGACGCTTGATGGCGGCTATGTCAAATGTCCATGACA
CTTTCATCAATGCGGCATGCTCAGAAGCATTGTCCATTCTCGATGGAATGCAGCTTGTTGAGCGGTTAGGATACTCTAAGGTACACATCCTCTCGGACTCATTAACAAAT
GTCGCTATGATTAATGGGGTGCAACGAACGACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTGGGTACACCGATGGCTACTTCTCCGACATCCTCTGCGAAAACAGGAACAGAGGGATCCCCGTCGCCGATCAGCGTTGATGGGATCTCCAAGTCACCGGCGCC
GGTTACGAAAATTGCATTAATGGACGTCTCTCCATTATTGCAGACAAGCGAAAAATCAAGGACGGTGATTGAAGGGATTTCGGAGAGGGAGAGCATTAAATGTGCCAGGC
GCTTAAATTTTGGGGAGGATCTCGCGGAGAAGACGGTGAACACGCGAGGATTTGGGGAAGAGGATTCGGTTAAGGAAGATGGGTTGTTGGGCCAAGGGAATGGAGATGGG
CCGGTACTAGGGGGCATTTCAATCGCGGGCCTCTTGCATGCCAGTGGGCTGGAAAACACTGTGGGTCTGTCTGTGCATAAGGAAGAAACAGGTTTAGGCAACCCCTTCAC
AGTCTCGATGGTGGGCCAAAACGAGGTTGGGCCTGGTAATCAATTGGCTGAAATTTCAAATCCGAGCTCGACCTTCAAAATTAAACCTTCACGATGGCATAGGCAGTCCA
GAGAACAGTCACAAGTGAAATCGAAGACTGATAAAGCTGAGGAGAAAAAGAGGAAGGGGGAAGCACTCATTGAGCCAAATAGCAAGAAACTAAATGGAGTTACAAAACAC
GATAAGGCGGATGAACGTGAAATTATGTTGGCGGCGAATATGAGCAACAAAGAGACGGGCAATACAAGGGCAGGTGGAAGTGTAGGCAGAAATGAGGATATAGGGGTGAA
TGTTTTCGTGGATGCAGCGTGTGATGAGTCTAAAGGGCGAACATGTGTTGGGGTTGCTGTTCGTGATCCAAATGGACGCTTGATGGCGGCTATGTCAAATGTCCATGACA
CTTTCATCAATGCGGCATGCTCAGAAGCATTGTCCATTCTCGATGGAATGCAGCTTGTTGAGCGGTTAGGATACTCTAAGGTACACATCCTCTCGGACTCATTAACAAAT
GTCGCTATGATTAATGGGGTGCAACGAACGACTGCTTGA
Protein sequenceShow/hide protein sequence
MSLGTPMATSPTSSAKTGTEGSPSPISVDGISKSPAPVTKIALMDVSPLLQTSEKSRTVIEGISERESIKCARRLNFGEDLAEKTVNTRGFGEEDSVKEDGLLGQGNGDG
PVLGGISIAGLLHASGLENTVGLSVHKEETGLGNPFTVSMVGQNEVGPGNQLAEISNPSSTFKIKPSRWHRQSREQSQVKSKTDKAEEKKRKGEALIEPNSKKLNGVTKH
DKADEREIMLAANMSNKETGNTRAGGSVGRNEDIGVNVFVDAACDESKGRTCVGVAVRDPNGRLMAAMSNVHDTFINAACSEALSILDGMQLVERLGYSKVHILSDSLTN
VAMINGVQRTTA