; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015556 (gene) of Snake gourd v1 genome

Gene IDTan0015556
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG11:20935636..20936457
RNA-Seq ExpressionTan0015556
SyntenyTan0015556
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2301769.1 hypothetical protein Bca52824_030420 [Brassica carinata]5.1e-2953.85Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADHS-------------LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRL
        MGLQ QL+D SSDS+PL  ++LLA F   +R FFL  +    D S             L   L LNRL S+RY ++++A A DC+VCLS L +G  VR+L
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADHS-------------LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRL

Query:  PCRHLFHKDCLDGWLHHLNFNCPLCRSPLL
         CRH+FHK CL+GWL HLNFNCPLCRSPLL
Subjt:  PCRHLFHKDCLDGWLHHLNFNCPLCRSPLL

KAG2302105.1 hypothetical protein Bca52824_030756 [Brassica carinata]1.5e-2854.69Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL-----SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPC
        MGLQ QL+D SSDS+PL  L+LLA     LR FFL       A PS    L +       L LNRL S+R+ +D++A A DC+VCLS L  G  VR+L C
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL-----SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPC

Query:  RHLFHKDCLDGWLHHLNFNCPLCRSPLL
        RH+FHK CL+GW+ HLNFNCPLCRSPL+
Subjt:  RHLFHKDCLDGWLHHLNFNCPLCRSPLL

KAG7032532.1 E3 ubiquitin-protein ligase RHA2B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5077.14Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADHS---LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDC
        MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRR FLS+  PS D     L  HLHLNRLLSHRY  DS+  A DCVVCL PLSAG+ VRRLPC H+FHKDC
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADHS---LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDC

Query:  LDGWLHHLNFNCPLCRSPLLLDQRVPFTRHRLRLPDHVIA
        LDGWLHHLNFNCPLCRSP+ L QRVPFT H   LP HV+A
Subjt:  LDGWLHHLNFNCPLCRSPLLLDQRVPFTRHRLRLPDHVIA

XP_022006424.1 E3 ubiquitin-protein ligase RHA2B [Helianthus annuus]4.1e-3157.04Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRF---FLSAAP-PSADH---SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLF
        MGLQ+ L D SSDSLPL  L+ +A  +S LR     FL  +P PS D    +L HHL+LN LLS  Y  D      DCVVCL+ L+AG  VR+LPC H+F
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRF---FLSAAP-PSADH---SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLF

Query:  HKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHR
        HK+C DGWLHHLNFNCPLCRSP++ D+RV  TR R
Subjt:  HKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHR

XP_022552698.1 E3 ubiquitin-protein ligase RHA2B-like [Brassica napus]3.3e-2854.89Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL----------SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV
        MGLQ QL+D SSDS+PL  ++LLA     +R FFL            A PSA   L +       L LNRL SHRY  D++A A DC+VCLS L  G  V
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL----------SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV

Query:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL
        R+L CRH+FHK CL+GWL HLNFNCPLCRSPLL
Subjt:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL

TrEMBL top hitse value%identityAlignment
A0A078HR84 BnaA09g18490D protein6.0e-2850.76Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL---------------SAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVR
        MGLQ QL+D SSDS+PL  ++L+A F   LR FFL               +++  S   +L   L LNRLLS+ Y ++++A A DC+VCLS L  G  VR
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL---------------SAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVR

Query:  RLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL
        +L CRH+FHK CL+GW+ HLNFNCPLCRSPL+
Subjt:  RLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL

A0A251SN01 Putative zinc finger, RING/FYVE/PHD-type2.0e-3157.04Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRF---FLSAAP-PSADH---SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLF
        MGLQ+ L D SSDSLPL  L+ +A  +S LR     FL  +P PS D    +L HHL+LN LLS  Y  D      DCVVCL+ L+AG  VR+LPC H+F
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRF---FLSAAP-PSADH---SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLF

Query:  HKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHR
        HK+C DGWLHHLNFNCPLCRSP++ D+RV  TR R
Subjt:  HKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHR

A0A3P6DE91 RING-type domain-containing protein1.6e-2854.89Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL----------SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV
        MGLQ QL+D SSDS+PL  ++LLA     +R FFL            A PSA   L +       L LNRL SHRY  D++A A DC+VCLS L  G  V
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL----------SAAPPSADHSLPH------HLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV

Query:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL
        R+L CRH+FHK CL+GWL HLNFNCPLCRSPLL
Subjt:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL

A0A5C7HJU7 RING-type domain-containing protein7.9e-2849.68Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLS---------AAPPSADHS----------------LPHHLHLNRLLSHRYPEDSSA-PAC--DCV
        MGLQ QLND SSDS+PL  ++L+ANF++ LR F LS           P   D +                L   L+LNR+ S+RY    SA  AC  DCV
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLS---------AAPPSADHS----------------LPHHLHLNRLLSHRYPEDSSA-PAC--DCV

Query:  VCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHRL
        VCL  L  G  VRRL CRH+FHK+C DGWL HLNFNCPLCRS LL D+ V  TR R+
Subjt:  VCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTRHRL

W9RAQ2 E3 ubiquitin-protein ligase RHA2A2.7e-2849.32Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAP------PSADH----------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV
        MGLQSQLND SSDS+PL  ++++AN +S +R   L   P      P  D            L   L+LNR+ S+RY +  +    DCVVCLS L+ G  V
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAP------PSADH----------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV

Query:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL----LDQRVPFTRHR
        RRL CRH+FHKDC DGWL HLNF+CPLCRSPL+     D+ V  TR R
Subjt:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLL----LDQRVPFTRHR

SwissProt top hitse value%identityAlignment
Q7T0Q3 E3 ubiquitin-protein ligase RNF126-A5.1e-0832.98Show/hide
Query:  LANFLSLLRRFFLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPL
        L   ++ L   F +  PP AD+       +  L + +  E+      +C VC    + G  VR+LPC HLFH DC+  WL   +  CP+CR  L
Subjt:  LANFLSLLRRFFLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPL

Q8GYT9 E3 ubiquitin-protein ligase SIS33.9e-0838.37Show/hide
Query:  FLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLD
        +L+ A   A  +L   L   RL +   P+D      +C++CL     GH VR LPC H FH +C+D WL  LN  CP CR  +  D
Subjt:  FLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLD

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO4.6e-0946.94Show/hide
Query:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL
        +C VCLS       + +L C HLFHK CL+ W+ + N  CPLCR+PL++
Subjt:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL

Q9ZT50 E3 ubiquitin-protein ligase RHA2A2.4e-2648.59Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADH----------------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV
        MGLQ QL+D SSDS+PL  LSLLA F++ LR F L     S  +                 L   L LNRL S+R   D      DCVVCLS L  G  V
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADH----------------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV

Query:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTR
        R+L CRH+FHK CL+GWLH  NF CPLCRS L+ D  V  T+
Subjt:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTR

Q9ZU51 E3 ubiquitin-protein ligase RHA2B1.4e-2956.91Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL--SAAPPSADHS----LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFH
        MGLQ QL+D SSDS+PL  L+LLA F   +R   L  S+AP     S    L   L+LNRL S+RY +++   A DC+VCLS L  G  VR+L CRH+FH
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL--SAAPPSADHS----LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFH

Query:  KDCLDGWLHHLNFNCPLCRSPLL
        K CL+GWL HLNFNCPLCRSPLL
Subjt:  KDCLDGWLHHLNFNCPLCRSPLL

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A1.7e-2748.59Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADH----------------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV
        MGLQ QL+D SSDS+PL  LSLLA F++ LR F L     S  +                 L   L LNRL S+R   D      DCVVCLS L  G  V
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADH----------------SLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLV

Query:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTR
        R+L CRH+FHK CL+GWLH  NF CPLCRS L+ D  V  T+
Subjt:  RRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLDQRVPFTR

AT2G01150.1 RING-H2 finger protein 2B9.8e-3156.91Show/hide
Query:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL--SAAPPSADHS----LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFH
        MGLQ QL+D SSDS+PL  L+LLA F   +R   L  S+AP     S    L   L+LNRL S+RY +++   A DC+VCLS L  G  VR+L CRH+FH
Subjt:  MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFL--SAAPPSADHS----LPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFH

Query:  KDCLDGWLHHLNFNCPLCRSPLL
        K CL+GWL HLNFNCPLCRSPLL
Subjt:  KDCLDGWLHHLNFNCPLCRSPLL

AT2G04240.1 RING/U-box superfamily protein3.3e-1046.94Show/hide
Query:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL
        +C VCLS       + +L C HLFHK CL+ W+ + N  CPLCR+PL++
Subjt:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL

AT2G04240.2 RING/U-box superfamily protein3.3e-1046.94Show/hide
Query:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL
        +C VCLS       + +L C HLFHK CL+ W+ + N  CPLCR+PL++
Subjt:  DCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLL

AT3G47990.1 SUGAR-INSENSITIVE 32.8e-0938.37Show/hide
Query:  FLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLD
        +L+ A   A  +L   L   RL +   P+D      +C++CL     GH VR LPC H FH +C+D WL  LN  CP CR  +  D
Subjt:  FLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCPLCRSPLLLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTACAGAGCCAACTCAACGACTTCTCCTCCGACTCTCTCCCTCTCTTCTTCCTCTCTCTCCTCGCCAATTTCCTCTCTCTCCTCCGCCGCTTCTTTCTCTCCGC
CGCCCCTCCCTCCGCCGACCACTCTCTCCCCCACCATCTTCATCTCAATCGCCTCCTCTCCCACCGCTACCCGGAAGACTCCTCCGCCCCCGCCTGCGACTGCGTCGTCT
GCCTCTCCCCCCTCTCCGCCGGCCACCTCGTCCGCCGCCTCCCCTGCCGTCACCTCTTCCACAAGGACTGCCTCGACGGTTGGCTTCATCATCTCAACTTCAACTGCCCT
CTCTGCCGCTCTCCTCTTCTTTTAGACCAGCGCGTTCCCTTCACGCGCCACCGCCTCCGTCTCCCTGACCACGTCATCGCTTGA
mRNA sequenceShow/hide mRNA sequence
CCACAATCTCTTTTCTCTCTCTTTTTAAGCATAAAAGGAAAAGGCAAAGAGCGGTTCTCTCAATTTCTGAAACACAGTTTTTAGGCATTTTTAATTCTTCAAATTATGGG
TTTACAGAGCCAACTCAACGACTTCTCCTCCGACTCTCTCCCTCTCTTCTTCCTCTCTCTCCTCGCCAATTTCCTCTCTCTCCTCCGCCGCTTCTTTCTCTCCGCCGCCC
CTCCCTCCGCCGACCACTCTCTCCCCCACCATCTTCATCTCAATCGCCTCCTCTCCCACCGCTACCCGGAAGACTCCTCCGCCCCCGCCTGCGACTGCGTCGTCTGCCTC
TCCCCCCTCTCCGCCGGCCACCTCGTCCGCCGCCTCCCCTGCCGTCACCTCTTCCACAAGGACTGCCTCGACGGTTGGCTTCATCATCTCAACTTCAACTGCCCTCTCTG
CCGCTCTCCTCTTCTTTTAGACCAGCGCGTTCCCTTCACGCGCCACCGCCTCCGTCTCCCTGACCACGTCATCGCTTGATTCTCTGTACGATGATCCTACGGCTGTGGAT
CTACCACGTGTTCGCATCCTTGTGATTCCTCCTGATGATGATCCCCCATTTCTTTCTTTCTTTTACCTTTTTCTGGGTATTATTATTATTATTTTTTTACATTCTTTTAC
CTTTTTTTTTTACAATTTTTTAGGGGGGGTCCTCTTATGGCAGTTTTGACCATGGGCTTTCCTTTTTTTATTTTTATTTTTTTAGATATTTAAATATATTTCTAGATTTT
TTTTTTCTTTTCCTTTTTTTGGAAGAATCCTCACGGATTTTTTATGATTTAC
Protein sequenceShow/hide protein sequence
MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRFFLSAAPPSADHSLPHHLHLNRLLSHRYPEDSSAPACDCVVCLSPLSAGHLVRRLPCRHLFHKDCLDGWLHHLNFNCP
LCRSPLLLDQRVPFTRHRLRLPDHVIA