; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015566 (gene) of Snake gourd v1 genome

Gene IDTan0015566
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:76798760..76799398
RNA-Seq ExpressionTan0015566
SyntenyTan0015566
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4182.76Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS------QHHHQHKESEPEKPPVLKKWQHPAAP
        MA+SQRR S  + R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSGS SSS       HHH HKESEPEKPPV KKWQHPAAP
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS------QHHHQHKESEPEKPPVLKKWQHPAAP

Query:  FHYDSGPRAPR-FVPV
        FHYDSG RAPR FVPV
Subjt:  FHYDSGPRAPR-FVPV

XP_022930471.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]2.1e-4184.96Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG---SSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY
        MA+SQRR S  + R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSG   SSSS  HHH HKESEPEKPPV KKWQHPAAPFHY
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG---SSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY

Query:  DSGPRAPR-FVPV
        DSG RAPR FVPV
Subjt:  DSGPRAPR-FVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]1.2e-4184.35Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS-----QHHHQHKESEPEKPPVLKKWQHPAAPF
        MA+SQRR S A+ R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSGS SSS      HHH HKESEPEKPPV KKWQHPAAPF
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS-----QHHHQHKESEPEKPPVLKKWQHPAAPF

Query:  HYDSGPRAPR-FVPV
        HYDSG RAPR FVPV
Subjt:  HYDSGPRAPR-FVPV

XP_023515028.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-4185.71Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS--QHHHQHKESEPEKPPVLKKWQHPAAPFHYD
        MA+SQRR SA + R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSG+ SSS   HHH HKESEPEKPPV KKWQHPAAPFHYD
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS--QHHHQHKESEPEKPPVLKKWQHPAAPFHYD

Query:  SGPRAPR-FVPV
        SG RAPR FVPV
Subjt:  SGPRAPR-FVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]7.1e-4288.39Show/hide
Query:  MADSQRRTSAAS-RRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADS--GSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY
        MADS RRTS AS R  QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSP +IQNWT DS   SSSSSQHHH HKESEPEKPPV KKWQHPAAPFHY
Subjt:  MADSQRRTSAAS-RRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADS--GSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        DSGPRAPRFVPV
Subjt:  DSGPRAPRFVPV

TrEMBL top hitse value%identityAlignment
A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like1.3e-3673.23Show/hide
Query:  MADSQRRTS-AASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTAD--------SGSSSSSQHHH---------QHKESEPEKP
        MADS RRTS   +R  QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSP +IQNWT D        S SSSSS HHH          HKE E EK 
Subjt:  MADSQRRTS-AASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTAD--------SGSSSSSQHHH---------QHKESEPEKP

Query:  PVLKKWQHPAAPFHYDSGPRAPRFVPV
        PV KKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVLKKWQHPAAPFHYDSGPRAPRFVPV

A0A6J1CA35 uncharacterized protein At4g14450, chloroplastic-like2.9e-3378.57Show/hide
Query:  MADSQRRTS-AASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKP--PVLKKWQHPAAPFHY
        MAD+QRRTS A SRRQQQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQN    S SS           S+PEKP  PV KKWQHPAAPFHY
Subjt:  MADSQRRTS-AASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKP--PVLKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        DSGPRAPRFVPV
Subjt:  DSGPRAPRFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like1.0e-4184.96Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG---SSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY
        MA+SQRR S  + R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSG   SSSS  HHH HKESEPEKPPV KKWQHPAAPFHY
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG---SSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY

Query:  DSGPRAPR-FVPV
        DSG RAPR FVPV
Subjt:  DSGPRAPR-FVPV

A0A6J1H320 uncharacterized protein At4g14450, chloroplastic-like1.3e-3070.43Show/hide
Query:  MADSQRRTS---AASRR----QQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAA
        MADS RRTS    ASRR    QQQP   + RAPASLQINR DWKVAIPLL+PLVSPSSP EIQ W  +SG  SS+  +  HKESEPEKPPV KKWQHPAA
Subjt:  MADSQRRTS---AASRR----QQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAA

Query:  PFHYDSGPRAPRFVP
        PF YDSGP  PRF+P
Subjt:  PFHYDSGPRAPRFVP

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like5.8e-4284.35Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS-----QHHHQHKESEPEKPPVLKKWQHPAAPF
        MA+SQRR S A+ R+QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSPTEIQNWTADSGS SSS      HHH HKESEPEKPPV KKWQHPAAPF
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSS-----QHHHQHKESEPEKPPVLKKWQHPAAPF

Query:  HYDSGPRAPR-FVPV
        HYDSG RAPR FVPV
Subjt:  HYDSGPRAPR-FVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic2.4e-0842.61Show/hide
Query:  QRRTSAASRRQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHH---HQHK-----ESEPEKPPVLKKWQHPAAP
        QR +S+A+  ++Q S+LQRRAP+ +    + S+W VAIPLLSPL             A S +SS  Q H    Q+K     E E +K PV KKWQHPA+P
Subjt:  QRRTSAASRRQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHH---HQHK-----ESEPEKPPVLKKWQHPAAP

Query:  FHYDSGPRAPRFVPV
        F Y+     P F+ V
Subjt:  FHYDSGPRAPRFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein1.1e-1145.19Show/hide
Query:  MADSQRRTSAASRRQQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY
        M+ + R  S +  R+   SRLQRRAP  L+IN   ++WKVAIPLLSP  S P  P  +             +   Q    E EKPPV KKWQHPAAPF+Y
Subjt:  MADSQRRTSAASRRQQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHY

Query:  DSGP
           P
Subjt:  DSGP

AT3G23170.1 unknown protein3.8e-0943Show/hide
Query:  QQQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHYDSGPRAPRFVPV
        ++QPSRL +R PA   +      ++W  AIPLLSPL +SP S          S         +Q      EK PV KKWQHPAAPF+Y+S    P FVPV
Subjt:  QQQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHYDSGPRAPRFVPV

AT4G14450.1 unknown protein1.7e-0942.61Show/hide
Query:  QRRTSAASRRQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHH---HQHK-----ESEPEKPPVLKKWQHPAAP
        QR +S+A+  ++Q S+LQRRAP+ +    + S+W VAIPLLSPL             A S +SS  Q H    Q+K     E E +K PV KKWQHPA+P
Subjt:  QRRTSAASRRQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHH---HQHK-----ESEPEKPPVLKKWQHPAAP

Query:  FHYDSGPRAPRFVPV
        F Y+     P F+ V
Subjt:  FHYDSGPRAPRFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCACAGCGACGAACCTCCGCCGCTTCACGCCGCCAACAGCAGCCGAGCCGTCTCCAGCGCCGGGCTCCGGCGTCCCTGCAAATCAACCGCTCCGATTGGAA
GGTCGCCATCCCTCTCTTATCCCCACTCGTCTCTCCCTCCTCGCCGACAGAGATCCAAAATTGGACGGCCGATTCAGGATCGAGTTCTTCATCTCAGCATCATCATCAAC
ATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTCTTAAGAAATGGCAGCATCCGGCCGCGCCTTTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTTGTACCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
TATAATTACCCCTTTCTCCTCTTCCTCTTCCTTCTTATCTTCTCCATTAATTCCCAATCCCCTCTCTCTCTTCATGGCCGACTCACAGCGACGAACCTCCGCCGCTTCAC
GCCGCCAACAGCAGCCGAGCCGTCTCCAGCGCCGGGCTCCGGCGTCCCTGCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTATCCCCACTCGTCTCTCCC
TCCTCGCCGACAGAGATCCAAAATTGGACGGCCGATTCAGGATCGAGTTCTTCATCTCAGCATCATCATCAACATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTCTTAA
GAAATGGCAGCATCCGGCCGCGCCTTTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTTGTACCCGTTTAGATTTCTTTTCTTTTTTTTTAATAAACTCGATTTGGAT
GGATCTGTAATCAGAAGAAATTGTAGTCTGTAGATCTAACGGTCTGTTTTTGACGAGCTTATCGATTGGATCTTATGCTTAACCACACTTGATTATTTGTACACATATTT
GATTTTTTTTTTTTTAATTTTTGCCTTCAGGCACTAGTATTATATTATTTGGTCATATCACTGATCATACTGCTAACGTTTAAATTGAA
Protein sequenceShow/hide protein sequence
MADSQRRTSAASRRQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSSSSSQHHHQHKESEPEKPPVLKKWQHPAAPFHYDSGPRAPRFVPV