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Tan0015606 (gene) of Snake gourd v1 genome

Gene IDTan0015606
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationLG02:2665686..2666000
RNA-Seq ExpressionTan0015606
SyntenyTan0015606
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3777.88Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MKLV ENLTGSLFYV+V+D ATV DLR+EISSQQ+LPSDRL+FV D +RGRLIS  DDG SLVDFG+RDGS IY+FFCPLDD+  DD DARQLFF CPDL
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]7.0e-3171.96Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISS---QQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFT-
        MKLVV+NLTGSLF+V+VEDDATV DLR++I++   Q NLPS RLIF+ D N  RLIS  DDGISLVDFG+RDGSHIYIFF PL DDDGDD +AR+ FFT 
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISS---QQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]2.9e-2965.22Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQN--LPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDD-----GDDRD----
        MKL VENLTGSLF++QV+DDATV DL++EIS+  N  LPSDRLIF++DDN GR IS DDDG SLVD GV+DGSHIYIFF PLD +D     GDD D    
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQN--LPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDD-----GDDRD----

Query:  ARQLFFTCPDLLLFE
        +R  FFTC ++LLF+
Subjt:  ARQLFFTCPDLLLFE

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]1.5e-3676.92Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MKLV ENLTGSLFYV+V+D ATV DLR+EISSQQ+LPSDRL+FV D +RGRLIS  DDG SLVDFG+RDGS IY+FFCPLD++  DD DARQLFF CPDL
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]5.3e-3981.73Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MKLV ENLTGSLFYV+V+D ATV DLR+EISSQQ+LPSDRL+FV D +RGRLIS  DDGISLVDFG+RDGS IYIFFCPLDDD GDD DARQLFF CPDL
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein3.4e-3171.96Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISS---QQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFT-
        MKLVV+NLTGSLF+V+VEDDATV DLR++I++   Q NLPS RLIF+ D N  RLIS  DDGISLVDFG+RDGSHIYIFF PL DDDGDD +AR+ FFT 
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISS---QQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A4P1RCV9 Ubiquitin-like domain-containing protein2.9e-2255.88Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MK+VVENLTG+LFY+QV +DAT+ DL+ EI +QQ LP DRLI V D +R  L+  D++ +SLVD GV+DGSHIY+FF PLD++D ++    Q+ FT PD 
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LL
         +
Subjt:  LL

A0A6J1C3E5 uncharacterized protein LOC1110078941.4e-2965.22Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQN--LPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDD-----GDDRD----
        MKL VENLTGSLF++QV+DDATV DL++EIS+  N  LPSDRLIF++DDN GR IS DDDG SLVD GV+DGSHIYIFF PLD +D     GDD D    
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQN--LPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDD-----GDDRD----

Query:  ARQLFFTCPDLLLFE
        +R  FFTC ++LLF+
Subjt:  ARQLFFTCPDLLLFE

A0A6J1ERN4 uncharacterized protein LOC1114370937.1e-3776.92Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MKLV ENLTGSLFYV+V+D ATV DLR+EISSQQ+LPSDRL+FV D +RGRLIS  DDG SLVDFG+RDGS IY+FFCPLD++  DD DARQLFF CPDL
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

A0A6J1JPI4 uncharacterized protein LOC1114865612.6e-3981.73Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL
        MKLV ENLTGSLFYV+V+D ATV DLR+EISSQQ+LPSDRL+FV D +RGRLIS  DDGISLVDFG+RDGS IYIFFCPLDDD GDD DARQLFF CPDL
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein3.3e-1042.31Show/hide
Query:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFV-SDDNRGRLISDDDDGISLVDFGVRDGSHIYIFF
        MK+ VE +TG+     V +DATV  ++ +I+ +  LP  RLI V  D+   RL+ +D+D + L D GV + SHIY+FF
Subjt:  MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFV-SDDNRGRLISDDDDGISLVDFGVRDGSHIYIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACGGTTTTTGATCTTAGAAGCGAGATCAGTTCTCAACAGAACCTCCC
TTCTGACCGTCTGATCTTTGTTTCCGACGACAATCGTGGCCGTCTGATCTCTGACGACGATGATGGAATCTCGCTCGTTGATTTTGGCGTCCGAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCCCTTGATGACGATGATGGCGATGATCGTGATGCTCGGCAGCTCTTCTTTACCTGTCCTGATCTTCTTCTCTTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACGGTTTTTGATCTTAGAAGCGAGATCAGTTCTCAACAGAACCTCCC
TTCTGACCGTCTGATCTTTGTTTCCGACGACAATCGTGGCCGTCTGATCTCTGACGACGATGATGGAATCTCGCTCGTTGATTTTGGCGTCCGAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCCCTTGATGACGATGATGGCGATGATCGTGATGCTCGGCAGCTCTTCTTTACCTGTCCTGATCTTCTTCTCTTCGAGTAG
Protein sequenceShow/hide protein sequence
MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDLLLFE