| GenBank top hits | e value | %identity | Alignment |
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| KAG6591223.1 Small nuclear ribonucleoprotein SmD3b, partial [Cucurbita argyrosperma subsp. sororia] | 6.1e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| XP_022151728.1 small nuclear ribonucleoprotein SmD3b-like [Momordica charantia] | 4.7e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGSATGRGA+PSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| XP_022937091.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita moschata] | 6.1e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| XP_022940723.1 small nuclear ribonucleoprotein SmD3b-like isoform X1 [Cucurbita moschata] | 1.4e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| XP_023522400.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita pepo subsp. pepo] | 1.8e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRG VPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1DDX8 Small nuclear ribonucleoprotein Sm D3 | 2.3e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGSATGRGA+PSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| A0A6J1F9D0 Small nuclear ribonucleoprotein Sm D3 | 3.0e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| A0A6J1FQ35 Small nuclear ribonucleoprotein Sm D3 | 6.6e-64 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| A0A6J1IBE9 Small nuclear ribonucleoprotein Sm D3 | 3.0e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| A0A6J1IVB4 Small nuclear ribonucleoprotein Sm D3 | 6.6e-64 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62318 Small nuclear ribonucleoprotein Sm D3 | 2.3e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGSATGRGAVPSARR
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| P62320 Small nuclear ribonucleoprotein Sm D3 | 2.3e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGSATGRGAVPSARR
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| P62323 Small nuclear ribonucleoprotein Sm D3 | 2.3e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGSATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGSATGRGAVPSARR
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| Q9LM92 Small nuclear ribonucleoprotein SmD3b | 2.0e-54 | 86.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GHIV+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPSARR
VGRGR AMR K AAG G T GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPSARR
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| Q9S7E6 Small nuclear ribonucleoprotein SmD3a | 1.0e-53 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GHIVSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGR AMRAK GRG+ GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.5e-55 | 86.47 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GHIV+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPSARR
VGRGR AMR K AAG G T GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGSAT-GRGAVPSARR
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| AT1G76300.1 snRNP core protein SMD3 | 7.2e-55 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GHIVSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
VGRGR AMRAK GRG+ GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGSATGRGAVPSARR
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 6.6e-08 | 28.93 | Show/hide |
Query: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSATGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSATGRG
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 6.6e-08 | 28.93 | Show/hide |
Query: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGSATGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGSATGRG
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.4e-10 | 32.77 | Show/hide |
Query: IPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ ++++ +PD + + ++ R K +G GRGR
Subjt: IPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
Query: AVAMRAKAQAAGRGSATGR
V A+ GRG++ G+
Subjt: AVAMRAKAQAAGRGSATGR
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