; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015654 (gene) of Snake gourd v1 genome

Gene IDTan0015654
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein indeterminate-domain 16
Genome locationLG09:73470566..73471291
RNA-Seq ExpressionTan0015654
SyntenyTan0015654
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]1.2e-7594.15Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPIRP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]4.0e-7694.74Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPIRP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_022921773.1 protein indeterminate-domain 16-like [Cucurbita moschata]1.7e-7190.59Show/hide
Query:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RPIRP  AEC+FKYEEVMKPEAASCVEALKWQAAEQIRLAAM
Subjt:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_023516632.1 protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-7190.53Show/hide
Query:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RPIRP  AEC+FKYEEVMKPEAA CVEALKWQAAEQIRLAAM
Subjt:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
        EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]9.8e-7595.27Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFE-PGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAME
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSD FE  G GS+DLQLSISLRPIRPA AECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAME
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFE-PGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAME

Query:  KAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        KAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  KAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

TrEMBL top hitse value%identityAlignment
A0A1S3CN02 protein indeterminate-domain 161.9e-7694.74Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPIRP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5A7UWD1 Protein indeterminate-domain 165.6e-7694.15Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPIRP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5D3BFD1 Protein indeterminate-domain 161.9e-7694.74Show/hide
Query:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPIRP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPIRP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like8.4e-7290.59Show/hide
Query:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RPIRP  AEC+FKYEEVMKPEAASCVEALKWQAAEQIRLAAM
Subjt:  MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1JFV3 protein indeterminate-domain 16-like1.1e-7189.47Show/hide
Query:  MEDEDQKELQLLPTPQSI---ASSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTP +I   +SSSSHMS+RPS SS+RFRSDP+EPG GSLDLQLSIS+RPIRP  AEC+FKYE+VMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPQSI---ASSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 51.3e-0841.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9C9X7 Protein indeterminate-domain 147.7e-0634.43Show/hide
Query:  GSLDLQLSISLRPIRPAGAECLFKYE-EVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKER
        GS++LQ    L P R    E         M  +  S VE   ++  E     ++E+   E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E 
Subjt:  GSLDLQLSISLRPIRPAGAECLFKYE-EVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKER

Query:  ATRQMDSTCMEITCQSCRQRFR
        A+R++ +T M+ITC +C+Q F+
Subjt:  ATRQMDSTCMEITCQSCRQRFR

Q9FRH4 Protein indeterminate-domain 161.5e-0634.88Show/hide
Query:  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEK
        S PFE    SL+LQLSI +     A      ++ E  +          K +A E+ R        AE  R+  KR+IE+A+ +F +A+++ E A+ E+EK
Subjt:  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEK

Query:  AERMKERATRQMDSTCMEITCQSCRQRFR
        A  ++E A +++++T MEITC SC+Q F+
Subjt:  AERMKERATRQMDSTCMEITCQSCRQRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 161.1e-0734.88Show/hide
Query:  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEK
        S PFE    SL+LQLSI +     A      ++ E  +          K +A E+ R        AE  R+  KR+IE+A+ +F +A+++ E A+ E+EK
Subjt:  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEK

Query:  AERMKERATRQMDSTCMEITCQSCRQRFR
        A  ++E A +++++T MEITC SC+Q F+
Subjt:  AERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.1 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.2 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.3 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)4.4e-3354.44Show/hide
Query:  EDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT---GSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        + +  KELQLLP+P S  + S     RP+  +    ++     +     LDL+LSISL  I  A        EE+  P     VEALKWQAAEQIRLAA+
Subjt:  EDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT---GSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
        EKAYAERVRELT+RE+E+AQ+EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFRP
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTGCTTCCGACGCCTCAGTCCATAGCATCGTCCTCATCCCACATGTCGACCCGTCCATCCGACTCGTCGTTACGATTCCG
GTCCGATCCATTCGAACCGGGTACAGGATCGTTGGACCTGCAGTTATCAATAAGCCTAAGGCCAATCCGGCCGGCGGGGGCGGAGTGCTTATTCAAGTACGAGGAGGTGA
TGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTGAGAGAGCTTACA
AAGAGGGAAATAGAATTGGCTCAAACGGAATTTGCAAGGGCTCGACAGATGTGGGAAAGGGCTAGAGAAGAAGTGGAAAAAGCGGAACGAATGAAAGAGAGAGCCACTCG
GCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTGCTTCCGACGCCTCAGTCCATAGCATCGTCCTCATCCCACATGTCGACCCGTCCATCCGACTCGTCGTTACGATTCCG
GTCCGATCCATTCGAACCGGGTACAGGATCGTTGGACCTGCAGTTATCAATAAGCCTAAGGCCAATCCGGCCGGCGGGGGCGGAGTGCTTATTCAAGTACGAGGAGGTGA
TGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTGAGAGAGCTTACA
AAGAGGGAAATAGAATTGGCTCAAACGGAATTTGCAAGGGCTCGACAGATGTGGGAAAGGGCTAGAGAAGAAGTGGAAAAAGCGGAACGAATGAAAGAGAGAGCCACTCG
GCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATCAATAATACCCTTATTAATTACTTCCATTTTCCCATTTT
CACCCCCCATATTTTCTTCTATTTCATCAACCTACCTATACCTTATCAACCGTTATATGCAGAGTTTCTTTTAAGTCTCTGCCTGGCTGTTTTTTTTTCCCCTTTGAATT
AAGCAAAATAGAGAGAAAATATGGGTTATTAGTCAGATCATGATCATCTTCATCATCAAGTCACAC
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELT
KREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS