CuGenDBv2

Gene ID	Tan0015690
Organism	Trichosanthes anguina (Snake gourd v1)
Description	chromatin structure-remodeling complex protein BSH
Genome location	LG10:10993594..10998858
RNA-Seq Expression	Tan0015690
Synteny	Tan0015690
Gene Ontology terms	GO:0006338 - chromatin remodeling (biological process) GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0000228 - nuclear chromosome (cellular component) GO:0070603 - SWI/SNF superfamily-type complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR006939 - SNF5/SMARCB1/INI1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]

8.3e-128

97.5

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNY SDPEEFSRT CKDLGIDDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]

7.1e-127

96.67

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNY SDPEEFSRT CKDLGIDDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]

3.0e-125

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASASAHSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+T+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNY SDPEEFSRT CKDLGI+DPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVPASK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]

2.8e-123

93.75

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASA+SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLI+DQFLWDLNNY SDPEEFSRTFCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESR+SKKGRRGFEHV ASKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]

1.9e-127

96.67

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMY+GEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNY SDPEEFSRTFCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L868 Uncharacterized protein

4.0e-128

97.5

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNY SDPEEFSRT CKDLGIDDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X1

3.4e-127

96.67

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNY SDPEEFSRT CKDLGIDDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X1

3.4e-127

96.67

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASAS HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNY SDPEEFSRT CKDLGIDDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVP SKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X1

1.4e-125

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKASASAHSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+T+IAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNY SDPEEFSRT CKDLGI+DPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVPASK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH

3.0e-123

93.33

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASA+SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFIT+IAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVNNTLI+DQFLWDLNNY SDPEEFSRTFCKDLGI+DPEVGPAIA AIREQLYEIA+QNVASARESR+SKKGRRGFEHV ASKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

SwissProt top hits

e value

%identity

Alignment

O42467 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

2.3e-19

37.09

Show/hide

Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR
        H  A        +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P AF+  I  +I+ Q+  + +    +  T +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL
        V N  + DQF WD++   + PE+F+   C +LG    E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL

P93045 Chromatin structure-remodeling complex protein BSH

2.2e-107

78.33

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+T+IAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVN+TLIKDQFLWDLNN+ SDPEEF+RT CKDLG++DPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H  ASK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A

4.6e-20

37.75

Show/hide

Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL
        V N  + DQF WD++   + PE+F+   C +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

2.7e-20

37.75

Show/hide

Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR
        H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL
        V N  + DQF WD++   + PE+F+   C +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

4.6e-20

37.75

Show/hide

Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL
        V N  + DQF WD++   + PE+F+   C +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQL

Arabidopsis top hits

e value

%identity

Alignment

AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)

1.6e-108

78.33

Show/hide

Query:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+T+IAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF
        IKLDLRVN+TLIKDQFLWDLNN+ SDPEEF+RT CKDLG++DPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H  ASK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)

2.3e-107

78.1

Show/hide

Query:  MKASASAHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+T+IAQSIQSQL++FR++EGQDMYTGEKI
Subjt:  MKASASAHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKI

Query:  IPIKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVK
        IPIKLDLRVN+TLIKDQFLWDLNN+ SDPEEF+RT CKDLG++DPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H  ASK  G S+DL+K
Subjt:  IPIKLDLRVNNTLIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVK

Query:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        LF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAGCTTCGGCCTCAGCCCACTCAAAGGCTCCTTTCAAGTTCAGGATTCCGACGGCTGAGAATCTAGTGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCGTCCGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCCCCAGCATTTATAACACGAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTCCAATCAAGCTTGATCTCCGAGTGAACAATACA
CTCATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGCCAGTGACCCAGAAGAGTTCTCCAGAACATTCTGCAAAGATTTGGGTATTGATGACCCTGAAGTAGGACC
TGCAATTGCTTTTGCGATTAGAGAACAGCTCTATGAGATAGCCGTGCAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGGGGGTTCGAGCACG
TTCCAGCAAGCAAAACTGGAGGTGCCTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTT
GATCTTCTATCTAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACTGCTCGATAA

mRNA sequence

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Protein sequence

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MKASASAHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITRIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT
LIKDQFLWDLNNYASDPEEFSRTFCKDLGIDDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPASKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIV
DLLSNEEVDALEAKEERTAR

Tan0015690 (gene) of Snake gourd v1 genome