; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015693 (gene) of Snake gourd v1 genome

Gene IDTan0015693
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationLG05:34212495..34213073
RNA-Seq ExpressionTan0015693
SyntenyTan0015693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6880Show/hide
Query:  IKFCALLVFAVTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW----GGGGGGGGGGGGGGGGWGWGGGG
        + +  L+ F V +YG RAEGLKN       TFLTFS+LPRGNAGEGRN+SGNTTTVEVSKQNRGGGGGYGWGW    GGGGGGGGGGGGGGGGWGWGGGG
Subjt:  IKFCALLVFAVTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW----GGGGGGGGGGGGGGGGWGWGGGG

Query:  GGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRRRRRL
        GGWWKWGCG QPKSGR      RGGGRRKNV+ KR+Y+EEDY MGEFAEC+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHCRRRRRRL
Subjt:  GGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRRRRRL

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6779.89Show/hide
Query:  LVFAVTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---------GGGGGGGGGGGGGGGGWGWGGGGG
        + F V +YG RAEGLKN       TFLTFS+LPRGNAGEGRN+SGNTTTVEVSKQNRGGGGGYGWGW         GGGGGGGGGGGGGGGGWGWGGGGG
Subjt:  LVFAVTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---------GGGGGGGGGGGGGGGGWGWGGGGG

Query:  GWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRRRRRL
        GWWKWGCG QPKSGR      RGGGRRKNV+ KR+Y+EEDY MGEFAEC+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHCRRRRRRL
Subjt:  GWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRRRRRL

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]1.3e-6273.6Show/hide
Query:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN--RGGGGGYGWGW------GGGGGGGGGGGG
        MGWEN IK  AL++ A  IYG R AEGL N +MP N+TFLTFS+LP+ NAGE RN+S NT+TVEVSKQN   GGGGGYGWGW      GGGGGGGGGGGG
Subjt:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN--RGGGGGYGWGW------GGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGRQPKSGRGSKIGGR-GGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR
        GGGGWGWGGGGGGWWKWGCG +PK     K+G R   GRRKNV  K+MY+E+DYRMGEFA+C+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHC R
Subjt:  GGGGWGWGGGGGGWWKWGCGRQPKSGRGSKIGGR-GGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]2.0e-6375.65Show/hide
Query:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN-RGGGGGYGWGW---GGGGGGGGGGGGGGGG
        MGWEN IK  AL++ A  I G R AEGL N +MP N+TFLTFS+LP+ NAGE RN+S N+TTVEVSKQN  GGGGGYGWGW   GGGGGGGGGGGGGGGG
Subjt:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN-RGGGGGYGWGW---GGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRR
        WGWGGGGGGWWKWGCG QPKS R  +    GG R  NV GKRMY E+DYRMGEFA+C+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHC RR
Subjt:  WGWGGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRR

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]9.8e-6381.03Show/hide
Query:  VTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGRQ
        + +YG RAEGLKN       TFLTFS+LP GNAGEGRN+SGNTTTVEVSKQNRGGGGGYGWGW   GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCG Q
Subjt:  VTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGRQ

Query:  PKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR
        PKSGR      RGGGRRKNV+ KR+Y+EEDY +GEFAEC+VKGRCRGMRLDCPLHCGGPCFYDC +MCKAHCRR
Subjt:  PKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein9.6e-6475.65Show/hide
Query:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN-RGGGGGYGWGW---GGGGGGGGGGGGGGGG
        MGWEN IK  AL++ A  I G R AEGL N +MP N+TFLTFS+LP+ NAGE RN+S N+TTVEVSKQN  GGGGGYGWGW   GGGGGGGGGGGGGGGG
Subjt:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN-RGGGGGYGWGW---GGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRR
        WGWGGGGGGWWKWGCG QPKS R  +    GG R  NV GKRMY E+DYRMGEFA+C+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHC RR
Subjt:  WGWGGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRR

A0A1S3C029 keratin, type II cytoskeletal 16.2e-6373.6Show/hide
Query:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN--RGGGGGYGWGW------GGGGGGGGGGGG
        MGWEN IK  AL++ A  IYG R AEGL N +MP N+TFLTFS+LP+ NAGE RN+S NT+TVEVSKQN   GGGGGYGWGW      GGGGGGGGGGGG
Subjt:  MGWENRIKFCALLVFAVTIYGFR-AEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQN--RGGGGGYGWGW------GGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGRQPKSGRGSKIGGR-GGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR
        GGGGWGWGGGGGGWWKWGCG +PK     K+G R   GRRKNV  K+MY+E+DYRMGEFA+C+VKGRCRGMRLDCPLHCGGPCFYDC YMCKAHC R
Subjt:  GGGGWGWGGGGGGWWKWGCGRQPKSGRGSKIGGR-GGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR

A0A540M1B0 Uncharacterized protein1.9e-3249.34Show/hide
Query:  KFCALLVFAVTIYGFRAEGLKNETMPTNMT----------FLTFSQLPRGNAGEGRNNSGN-TTTVEVSKQ-----------------------NRGGGG
        K   LL     I G  A G K E    N T           L  +++P    GE RN + + TT V+++ +                       N GGGG
Subjt:  KFCALLVFAVTIYGFRAEGLKNETMPTNMT----------FLTFSQLPRGNAGEGRNNSGN-TTTVEVSKQ-----------------------NRGGGG

Query:  GYGWGWGGGGGGGGGG-------GGGGGGWGWGGGGG--GWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNG--KRMYDEEDYRMGEFAECIVKGRCRGMR
        GY WGWGGGGGGGGGG       GG GGGWGWGGGGG  GWWKWGCG     G+G   GGRG     +V G  KR +DEE+Y +GEFA+C+ KGRC+GMR
Subjt:  GYGWGWGGGGGGGGGG-------GGGGGGWGWGGGGG--GWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNG--KRMYDEEDYRMGEFAECIVKGRCRGMR

Query:  LDCPLHCGGPCFYDCLYMCKAHCRRRR
        LDCPLHCGGPCFYDC +MCKAHCRRRR
Subjt:  LDCPLHCGGPCFYDCLYMCKAHCRRRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like4.7e-6381.03Show/hide
Query:  VTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGRQ
        + +YG RAEGLKN       TFLTFS+LP GNAGEGRN+SGNTTTVEVSKQNRGGGGGYGWGW   GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCG Q
Subjt:  VTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGW---GGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGRQ

Query:  PKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR
        PKSGR      RGGGRRKNV+ KR+Y+EEDY +GEFAEC+VKGRCRGMRLDCPLHCGGPCFYDC +MCKAHCRR
Subjt:  PKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR

K7MNZ8 Uncharacterized protein9.7e-3252.69Show/hide
Query:  LVFAVTIYGFRAEGLKNET--MPTNMTFLTFSQLPRGNAGEGRNN-SGNTTTVEVSKQN---------RGGGGGYGWGWGGGGGGGGGGGGGGGGWGWGG
        L+  VTI   R E LKN T     N T  + S     N  +G++N S N      SK +          GGGGG+ WGWGGGGGGGGGGGGGG GWGWGG
Subjt:  LVFAVTIYGFRAEGLKNET--MPTNMTFLTFSQLPRGNAGEGRNN-SGNTTTVEVSKQN---------RGGGGGYGWGWGGGGGGGGGGGGGGGGWGWGG

Query:  GGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCR
        GGGGWWKWGC R+ + G+G          ++ V      + EDYRMGE+A+C+ + RCRG+RLDCPLHCGGPCFYDC +MCKAHCR
Subjt:  GGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein5.8e-2150.33Show/hide
Query:  EGRNNSGNTTTVEV-----SKQNRGGGGGYGWGW-------GGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGK
        +  NN  N+TT  V      +   GG G Y WGW       GGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCG              GGG+ K   G+
Subjt:  EGRNNSGNTTTVEV-----SKQNRGGGGGYGWGW-------GGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGRQPKSGRGSKIGGRGGGRRKNVNGK

Query:  RMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR
          + + +Y     AEC  +G+C G RL+CP HCGG CFYDCL++CK HCRR
Subjt:  RMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGGAAAATCGAATCAAGTTTTGTGCTCTCTTAGTTTTTGCAGTGACGATTTATGGGTTTAGAGCTGAGGGTTTGAAAAATGAAACTATGCCCACAAATATGAC
TTTCTTAACATTCTCGCAACTGCCACGGGGAAATGCAGGGGAAGGGAGAAACAATTCTGGTAATACTACAACGGTTGAGGTTAGCAAGCAGAATAGGGGAGGTGGCGGTG
GCTATGGGTGGGGATGGGGCGGAGGCGGTGGCGGTGGAGGTGGAGGTGGCGGTGGCGGTGGGGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGT
GGAAGACAGCCAAAATCTGGCAGAGGAAGCAAAATTGGAGGACGCGGCGGCGGGAGAAGGAAAAATGTAAACGGGAAGAGAATGTACGATGAGGAAGATTATAGAATGGG
AGAATTTGCGGAATGTATTGTGAAAGGAAGATGCAGAGGAATGAGATTGGATTGCCCACTCCACTGCGGCGGGCCTTGCTTTTACGACTGTCTATACATGTGCAAGGCTC
ACTGCCGACGTCGACGCCGACGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGGAAAATCGAATCAAGTTTTGTGCTCTCTTAGTTTTTGCAGTGACGATTTATGGGTTTAGAGCTGAGGGTTTGAAAAATGAAACTATGCCCACAAATATGAC
TTTCTTAACATTCTCGCAACTGCCACGGGGAAATGCAGGGGAAGGGAGAAACAATTCTGGTAATACTACAACGGTTGAGGTTAGCAAGCAGAATAGGGGAGGTGGCGGTG
GCTATGGGTGGGGATGGGGCGGAGGCGGTGGCGGTGGAGGTGGAGGTGGCGGTGGCGGTGGGGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGT
GGAAGACAGCCAAAATCTGGCAGAGGAAGCAAAATTGGAGGACGCGGCGGCGGGAGAAGGAAAAATGTAAACGGGAAGAGAATGTACGATGAGGAAGATTATAGAATGGG
AGAATTTGCGGAATGTATTGTGAAAGGAAGATGCAGAGGAATGAGATTGGATTGCCCACTCCACTGCGGCGGGCCTTGCTTTTACGACTGTCTATACATGTGCAAGGCTC
ACTGCCGACGTCGACGCCGACGCCTCTAA
Protein sequenceShow/hide protein sequence
MGWENRIKFCALLVFAVTIYGFRAEGLKNETMPTNMTFLTFSQLPRGNAGEGRNNSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGC
GRQPKSGRGSKIGGRGGGRRKNVNGKRMYDEEDYRMGEFAECIVKGRCRGMRLDCPLHCGGPCFYDCLYMCKAHCRRRRRRL