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Tan0015721 (gene) of Snake gourd v1 genome

Gene IDTan0015721
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG07:43761586..43765680
RNA-Seq ExpressionTan0015721
SyntenyTan0015721
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033241.1 hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa]1.1e-0873.81Show/hide
Query:  VHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        V+TG + L TL+VLRDN A+VSAGR PLRQR+WECWA PTTS
Subjt:  VHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]2.6e-0754.69Show/hide
Query:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        + PR N  S++ + + +       T +  LSTLSVL DN AVVSAG+APLRQRRWEC  GPTTS
Subjt:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

KAA0040296.1 hypothetical protein E6C27_scaffold2379G00310 [Cucumis melo var. makuwa]4.4e-0751.43Show/hide
Query:  VEFGLFDRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        +E G   + R N  S++   L +       T +  LSTLSVLR+N A VSAGR PLRQRRWEC  GPTTS
Subjt:  VEFGLFDRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]2.6e-0754.69Show/hide
Query:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        + PR N  S++ + + +       T +  LSTLSVL DN AVVSAG+APLRQRRWEC  GPTTS
Subjt:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

TYK27262.1 hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa]2.9e-0664.15Show/hide
Query:  KVLPEALWYRVHTGLIL-LSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        ++L  +L+  V T +I  LSTLSVLR+N A VSAGR PLRQRRWEC  GPTTS
Subjt:  KVLPEALWYRVHTGLIL-LSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

TrEMBL top hitse value%identityAlignment
A0A5A7SUV2 Uncharacterized protein5.1e-0973.81Show/hide
Query:  VHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        V+TG + L TL+VLRDN A+VSAGR PLRQR+WECWA PTTS
Subjt:  VHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

A0A5A7T7M6 Reverse transcriptase1.3e-0754.69Show/hide
Query:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        + PR N  S++ + + +       T +  LSTLSVL DN AVVSAG+APLRQRRWEC  GPTTS
Subjt:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

A0A5A7TDY3 Uncharacterized protein2.1e-0751.43Show/hide
Query:  VEFGLFDRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        +E G   + R N  S++   L +       T +  LSTLSVLR+N A VSAGR PLRQRRWEC  GPTTS
Subjt:  VEFGLFDRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

A0A5D3BTP3 Reverse transcriptase1.3e-0754.69Show/hide
Query:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        + PR N  S++ + + +       T +  LSTLSVL DN AVVSAG+APLRQRRWEC  GPTTS
Subjt:  DRPRANMSSVRAKVLPEALWYRVHTGLILLSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

A0A5D3DUS7 Uncharacterized protein1.4e-0664.15Show/hide
Query:  KVLPEALWYRVHTGLIL-LSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS
        ++L  +L+  V T +I  LSTLSVLR+N A VSAGR PLRQRRWEC  GPTTS
Subjt:  KVLPEALWYRVHTGLIL-LSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAATCTGTCCGCACAACCAGTTGAGCTGAAAGAAAACATGAGTTACGTAGAGGATGCAAAGACAAAATTTGCTGTCAAATCCGAGACGTCTCTGGTGTTTTGGTT
GTACTGGTCTGTAGAGTTGGAATCAGAAGCTCTAATAGAAGTTAGTTCCTGGGAAAGAAGCTTTCGAGGTATTTCGGAACCAATGTGTTGGGAATTTCAATTTCATGTTC
TAATGGTTGAATTTGGTTTGTTTGACAGGCCAAGAGCAAATATGTCGAGTGTACGGGCCAAGGTTCTACCCGAGGCTTTATGGTACCGTGTGCACACAGGTCTTATTCTG
TTGTCGACGTTGAGTGTACTCCGTGACAACAGCGCTGTCGTTAGTGCTGGGAGGGCCCCACTACGACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAATCTGTCCGCACAACCAGTTGAGCTGAAAGAAAACATGAGTTACGTAGAGGATGCAAAGACAAAATTTGCTGTCAAATCCGAGACGTCTCTGGTGTTTTGGTT
GTACTGGTCTGTAGAGTTGGAATCAGAAGCTCTAATAGAAGTTAGTTCCTGGGAAAGAAGCTTTCGAGGTATTTCGGAACCAATGTGTTGGGAATTTCAATTTCATGTTC
TAATGGTTGAATTTGGTTTGTTTGACAGGCCAAGAGCAAATATGTCGAGTGTACGGGCCAAGGTTCTACCCGAGGCTTTATGGTACCGTGTGCACACAGGTCTTATTCTG
TTGTCGACGTTGAGTGTACTCCGTGACAACAGCGCTGTCGTTAGTGCTGGGAGGGCCCCACTACGACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAG
Protein sequenceShow/hide protein sequence
MFNLSAQPVELKENMSYVEDAKTKFAVKSETSLVFWLYWSVELESEALIEVSSWERSFRGISEPMCWEFQFHVLMVEFGLFDRPRANMSSVRAKVLPEALWYRVHTGLIL
LSTLSVLRDNSAVVSAGRAPLRQRRWECWAGPTTS