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Tan0015723 (gene) of Snake gourd v1 genome

Gene IDTan0015723
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG11:21774679..21775029
RNA-Seq ExpressionTan0015723
SyntenyTan0015723
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
A0A5A7TU93 Gag/pol protein3.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
A0A5A7TWB9 Gag/pol protein3.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
A0A5A7V4M1 Gag/pol protein3.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
A0A5D3CPJ6 Gag/pol protein3.8e-3974.78Show/hide
Query:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL FR+N VMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLN

Query:  ELQTFESLMKSKGKE
        ELQTFESLMK KG++
Subjt:  ELQTFESLMKSKGKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACCGCTAAGGAGATCATGGGATCATTACAGGTGATTTTCGGACAACCGTCTTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTCCCGTATGAAAGA
GGGAGCCTCTGTTAGGGAACATGTCCTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACATTTATTATGGAAT
CTCTTCCGAAGAGTTTCCTGCCATTCCGCACCAATACGGTGATGAATAAAATAGAGTATAACCTGACTACCCTCCTCAATGAGCTTCAGACTTTTGAATCCCTAATGAAA
TCAAAGGGAAAAGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCACCGCTAAGGAGATCATGGGATCATTACAGGTGATTTTCGGACAACCGTCTTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTCCCGTATGAAAGA
GGGAGCCTCTGTTAGGGAACATGTCCTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACATTTATTATGGAAT
CTCTTCCGAAGAGTTTCCTGCCATTCCGCACCAATACGGTGATGAATAAAATAGAGTATAACCTGACTACCCTCCTCAATGAGCTTCAGACTTTTGAATCCCTAATGAAA
TCAAAGGGAAAAGAGAAGTAG
Protein sequenceShow/hide protein sequence
MVTAKEIMGSLQVIFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFRTNTVMNKIEYNLTTLLNELQTFESLMK
SKGKEK