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Tan0015733 (gene) of Snake gourd v1 genome

Gene IDTan0015733
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNucleolar protein 10
Genome locationLG07:73453302..73459231
RNA-Seq ExpressionTan0015733
SyntenyTan0015733
Gene Ontology termsGO:0031118 - rRNA pseudouridine synthesis (biological process)
GO:0031120 - snRNA pseudouridine synthesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031429 - box H/ACA snoRNP complex (cellular component)
GO:0090661 - box H/ACA telomerase RNP complex (cellular component)
GO:0034513 - box H/ACA snoRNA binding (molecular function)
GO:0070034 - telomerase RNA binding (molecular function)
InterPro domainsIPR007264 - H/ACA ribonucleoprotein complex, subunit Nop10
IPR036756 - H/ACA ribonucleoprotein complex, subunit Nop10 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2959896.1 H ACA ribonucleo complex subunit 3 [Olea europaea subsp. europaea]4.5e-2895.31Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYIN+NGDKVYTTKKESPLGL T+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

KAG6606368.1 H/ACA ribonucleoprotein complex subunit 3-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-29100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

XP_022855919.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Olea europaea var. sylvestris]4.5e-2895.31Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYIN+NGDKVYTTKKESPLGL T+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

XP_022931219.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Cucurbita moschata]2.4e-29100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

XP_030543963.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Rhodamnia argentea]1.2e-2898.44Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

TrEMBL top hitse value%identityAlignment
A0A1S3BHD2 Nucleolar protein 102.8e-2896.88Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ PPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

A0A2P2IS35 Nucleolar protein 102.8e-2896.88Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ PPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

A0A6J1EYV1 Nucleolar protein 101.1e-29100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

A0A6J1KA21 Nucleolar protein 101.1e-29100Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

A0A6P4CV10 Nucleolar protein 106.3e-2895.31Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQFYINDNGDKVYTTKKE+PLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ PPPKY
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

SwissProt top hitse value%identityAlignment
Q6DRH5 H/ACA ribonucleoprotein complex subunit 33.0e-1969.35Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP
        M+LQFY+N+NG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQ P P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP

Q93XX8 H/ACA ribonucleoprotein complex subunit 3-like protein3.7e-2582.81Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQ YIN+ G+KVYTTKKESPLGL T+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ+ P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

Q9CQS2 H/ACA ribonucleoprotein complex subunit 37.4e-1864.52Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP
        M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQ P P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP

Q9NPE3 H/ACA ribonucleoprotein complex subunit 37.4e-1864.52Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP
        M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQ P P
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPP

Q9V5P6 H/ACA ribonucleoprotein complex subunit 34.3e-1867.19Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYL + IN+NGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ P P Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

Arabidopsis top hitse value%identityAlignment
AT2G20490.1 nucleolar RNA-binding Nop10p family protein2.6e-2682.81Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQ YIN+ G+KVYTTKKESPLGL T+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ+ P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY

AT2G20490.2 nucleolar RNA-binding Nop10p family protein2.4e-2481.25Show/hide
Query:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY
        MYLQ YIN+ G+KVYTT KESPLGL T+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ+ P +Y
Subjt:  MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCTTCAGTTTTACATAAACGATAATGGTGACAAAGTTTACACCACAAAGAAAGAATCGCCTCTTGGTTTGGTCACACAATCTGCTCATCCAGCCCGTTTCTCCCC
TGATGACAAATACTCTCGACAGAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTACCCACGCAGCATCCACCTCCAAAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCTTCAGTTTTACATAAACGATAATGGTGACAAAGTTTACACCACAAAGAAAGAATCGCCTCTTGGTTTGGTCACACAATCTGCTCATCCAGCCCGTTTCTCCCC
TGATGACAAATACTCTCGACAGAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTACCCACGCAGCATCCACCTCCAAAGTACTGA
Protein sequenceShow/hide protein sequence
MYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQHPPPKY