; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015734 (gene) of Snake gourd v1 genome

Gene IDTan0015734
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIB domain-containing protein
Genome locationLG02:14221438..14223906
RNA-Seq ExpressionTan0015734
SyntenyTan0015734
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927946.1 uncharacterized protein LOC111434699 [Cucurbita moschata]6.6e-6190.58Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGE SLL  RASAT SSVKH YQ PP NL FARTVTFASTSNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]1.5e-6089.13Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGEPSLLV+RASA  SSVKH YQLP PNL F+RT+TFAS SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_022989003.1 uncharacterized protein LOC111486197 [Cucurbita maxima]3.9e-6190.58Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGE SLL  RASAT+SSVKH YQ PP NL FARTVTFASTSNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]1.5e-6089.13Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGEPSLLV+RASA  SSVKH YQLP PNL F+RT+TFAS SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KP+DKKIIICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]1.7e-6191.3Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGEPSLLV +ASATA+SVK  YQLP PNL FARTVTFAS SNQATAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A6J1D4Q4 uncharacterized protein LOC1110172912.6e-5583.33Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF SGEP+LLV+RAS  ASS+KHA QLPP NL F R VTFA+ S+QATASRR+PRGIMKPR ISPEMQALVG PEISRTQALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        +P +KKII+CDEKLKKIFGGKDEVGFL+IAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1EIX1 uncharacterized protein LOC1114346993.2e-6190.58Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGE SLL  RASAT SSVKH YQ PP NL FARTVTFASTSNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552447.1e-6189.13Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGEPSLLV+RASA  SSVKH YQLP PNL F+RT+TFAS SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710822.7e-6089.13Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGE SLL++RASA  SSVKH YQLP PNL F+RT+TFAS SNQATAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKII+CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861971.9e-6190.58Show/hide
Query:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGE SLL  RASAT+SSVKH YQ PP NL FARTVTFASTSNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.2e-0945.45Show/hide
Query:  KPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIF
        KP ++SP++   +G  ++SR Q +K +W +IK H+LQ P+DK+ I+CD+KLK +F
Subjt:  KPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIF

Q05024 Protein TRI14.2e-1050Show/hide
Query:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGK
        +S  +Q  +G+ E+ RTQ +K+IW +IKEH+LQ P D++ I+CDEK++ IFG K
Subjt:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGK

Q08747 Upstream activation factor subunit UAF301.8e-0848.08Show/hide
Query:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFG
        +S  + +L+G  E++RT+ ++ +WA+IK HNLQ P++KK I+CDEKL+ I G
Subjt:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFG

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein5.1e-1944.55Show/hide
Query:  LGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPH
        LG  RT+   + + +A     + +GI K R +S ++ +  G  E++R  ALK +W ++K HNLQ P++KK I CD+KLK IF GKD+VG  EI  L+SPH
Subjt:  LGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPH

Query:  F
        F
Subjt:  F

AT2G14880.1 SWIB/MDM2 domain superfamily protein5.3e-3260.83Show/hide
Query:  SATASSVKHAYQLPPPNLGFARTVTFASTSNQATA-SRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIF
        S   SS++ A   P   L   R VT A+ S++ TA ++R PRGIMKPR +SPEMQ +V  PEI+RTQALK IWA+IKEH+LQ P +K+ I+CDEKLKKIF
Subjt:  SATASSVKHAYQLPPPNLGFARTVTFASTSNQATA-SRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIF

Query:  GGKDEVGFLEIAGLISPHFL
         G+D VGFLEIA LI PHFL
Subjt:  GGKDEVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.5e-1846Show/hide
Query:  GFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHF
        G  R +   + S+    + RQ  GI+K   +S  +   +G  E+SRT A+K IW +IK +NLQ P +K+ I+CDE+LK IF GKD VGFLEI+ L+S HF
Subjt:  GFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein2.1e-2043.51Show/hide
Query:  GEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPR--GIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKI
        G  SLL   + AT+S V       P     A+        + + A ++ PR  GI K   +SP +   +G  E SRT A+K IW +IK H+LQ P+DK+ 
Subjt:  GEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPR--GIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKI

Query:  IICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        I CDE LK IF GKD+VGFLEI+ L+SPHF+
Subjt:  IICDEKLKKIFGGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.3e-3053.24Show/hide
Query:  FVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQ---ATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNL
        F +TF+  + + L  R+S  + S        P NL   R VT A+ ++     T   R+PRGIMKPR +S  MQ +VG PEI RTQALK IWA+IKEH+L
Subjt:  FVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQ---ATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNL

Query:  QKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        Q P +K+ I+CDEKLKKIF GK+ VGFLEIA LI PHFL
Subjt:  QKPSDKKIIICDEKLKKIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCGTTTCCACCTTCATCTCCGGCGAACCGTCGCTCCTCGTCTCAAGAGCCTCCGCCACCGCCTCCTCCGTCAAGCATGCCTATCAACTCCCACCGCCTAATTT
GGGCTTCGCCCGCACCGTTACCTTCGCTTCGACCTCCAACCAGGCCACTGCCTCCCGCCGGCAGCCCCGAGGCATCATGAAGCCCCGGAGGATTTCACCGGAGATGCAGG
CGCTTGTCGGCGCTCCCGAGATTTCTCGTACCCAAGCCCTTAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGAAACCAAGCGACAAGAAAATCATAATTTGC
GACGAGAAGCTGAAGAAAATATTCGGAGGGAAAGATGAAGTTGGGTTTCTGGAGATTGCAGGGTTAATAAGTCCCCACTTTCTATAA
mRNA sequenceShow/hide mRNA sequence
GCTTCACCTTCGCTCTATCCATTTTCCAAAAGCACACACTACAGAACCAGTCGTCAGTTCCGGCCATGGCTTTCGTTTCCACCTTCATCTCCGGCGAACCGTCGCTCCTC
GTCTCAAGAGCCTCCGCCACCGCCTCCTCCGTCAAGCATGCCTATCAACTCCCACCGCCTAATTTGGGCTTCGCCCGCACCGTTACCTTCGCTTCGACCTCCAACCAGGC
CACTGCCTCCCGCCGGCAGCCCCGAGGCATCATGAAGCCCCGGAGGATTTCACCGGAGATGCAGGCGCTTGTCGGCGCTCCCGAGATTTCTCGTACCCAAGCCCTTAAGG
TCATTTGGGCTCACATTAAAGAACATAATCTTCAGAAACCAAGCGACAAGAAAATCATAATTTGCGACGAGAAGCTGAAGAAAATATTCGGAGGGAAAGATGAAGTTGGG
TTTCTGGAGATTGCAGGGTTAATAAGTCCCCACTTTCTATAATGATTCAACCTATGGAAGATAGGCATCTGGGACCTTCAGTTCAGTCCATGAAGATGAACTTTCTTTTT
TTGTTGTGGGAGTCTCTCAATCTAGTTGATGTGGATGCTCAGGTATTTCTCACTGAATCCTGCAGCTCAGAGCCCCTTTTATCTAGTAGTTGAATAGGGAAGAAGCTTTT
GTAAGAACTTTATGTGGTGGTTTCTTGTAGGGATTGTTTTATGGGAAACCTTTATTAGTCATTAGTTTGGGTATAATGTTTCACTTTTGTATTATACCTGCCTACTTTTT
GTGTTTGGATTTGCCCTATTTTGGTTTTGAGAGCTTCCTCCACTTGTGCTGTTGCTGTTTGAAATCAGTGGATATTAAACAAACAATATAAGCTTTGAGAGATTTTTTCT
ATATAAAAAAA
Protein sequenceShow/hide protein sequence
MAFVSTFISGEPSLLVSRASATASSVKHAYQLPPPNLGFARTVTFASTSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKIIIC
DEKLKKIFGGKDEVGFLEIAGLISPHFL