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Tan0015736 (gene) of Snake gourd v1 genome

Gene IDTan0015736
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
Genome locationLG05:73989962..73994304
RNA-Seq ExpressionTan0015736
SyntenyTan0015736
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]3.3e-4895.83Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]1.1e-4896.88Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]3.0e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]1.0e-4998.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]3.9e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

TrEMBL top hitse value%identityAlignment
A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B1.6e-4895.83Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.4e-4996.88Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like1.4e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like4.9e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B5.4e-4996.88Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial8.5e-0740.62Show/hide
Query:  PDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYL
        P  FD    Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL KC HL ++YL
Subjt:  PDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B1.2e-4080.41Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A3.4e-4079.38Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH  KCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS62.4e-4179.38Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH  KCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.1 Complex I subunit NDUFS68.3e-4280.41Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.2 Complex I subunit NDUFS68.3e-4280.41Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGAGAACACATTGT
GAGAGAGAAATGGATCGATATCGAGAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGCATCGAAGGAGTAAACCATCTTCTGAAATGCCGCCACCTTGTCC
AACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCATCCATCCCTTCATGGTTCTCTCTTTTCCTTTCCTAACATTTTTCTCACTGGTGGTGTG
TTTTTTAGAATGCTTGAAATTGTTGTTCACAAGCCACTCAATCATATTTCTTTTAAGTTGGGGGGTGTTGAAGCTGTATATATCTTTGGGGGTGTTGTCATTCTATGGGG
TCCTCGTAATTTGTTCTCCTTAGAAGTGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGAGAACACATTGT
GAGAGAGAAATGGATCGATATCGAGAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGCATCGAAGGAGTAAACCATCTTCTGAAATGCCGCCACCTTGTCC
AACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCATCCATCCCTTCATGGTTCTCTCTTTTCCTTTCCTAACATTTTTCTCACTGGTGGTGTG
TTTTTTAGAATGCTTGAAATTGTTGTTCACAAGCCACTCAATCATATTTCTTTTAAGTTGGGGGGTGTTGAAGCTGTATATATCTTTGGGGGTGTTGTCATTCTATGGGG
TCCTCGTAATTTGTTCTCCTTAGAAGTGGTGTGA
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHGSLFSFPNIFLTGGV
FFRMLEIVVHKPLNHISFKLGGVEAVYIFGGVVILWGPRNLFSLEVV