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Tan0015742 (gene) of Snake gourd v1 genome

Gene IDTan0015742
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG05:56521799..56522542
RNA-Seq ExpressionTan0015742
SyntenyTan0015742
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.5e-1360.53Show/hide
Query:  TGDRGREVSRG------ESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD
        T +  RE + G      ESS P  E NMEEQ+  R+ QRL   + SAQ+DPEKKYGIERLKALGATTF GTT+PAD
Subjt:  TGDRGREVSRG------ESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.5e-1362.69Show/hide
Query:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL
        G   S  ESS PR E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D+
Subjt:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]5.5e-1362.69Show/hide
Query:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL
        G   S  ESS PR E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D+
Subjt:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]9.6e-1874.6Show/hide
Query:  VSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD
        +S GESSHP+ EVN+EEQ+FTRI QRLA S+GS ++DPEKKY IERLKALGATTFEGT DP +
Subjt:  VSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]2.7e-1279.59Show/hide
Query:  MEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD
        ME+++F RITQRLA SVGS Q DPEKK+GIERLKALGATTF+GTTDP D
Subjt:  MEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein9.4e-1160.61Show/hide
Query:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD
        G   S  ESS P  E N+EEQ+  R+ QRL   +  AQ+D EKKYGIERLKALGATTF GTT+P D
Subjt:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD

A0A5A7SKG0 Uncharacterized protein8.5e-1256.41Show/hide
Query:  ETGTQEATGDRGREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL
        E GT +AT    RE + G+S+H   + NMEE+IF +I QRLA+ V  AQAD EKKYGIER+KALGAT F+GT D  ++
Subjt:  ETGTQEATGDRGREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL

A0A5A7T1M0 Reverse transcriptase2.7e-1362.69Show/hide
Query:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL
        G   S  ESS PR E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D+
Subjt:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL

A0A5D3BB91 Reverse transcriptase2.7e-1362.69Show/hide
Query:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL
        G   S  ESS PR E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D+
Subjt:  GREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADL

A0A5D3DES5 DNA/RNA polymerases superfamily protein1.2e-1360.53Show/hide
Query:  TGDRGREVSRG------ESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD
        T +  RE + G      ESS P  E NMEEQ+  R+ QRL   + SAQ+DPEKKYGIERLKALGATTF GTT+PAD
Subjt:  TGDRGREVSRG------ESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTCTTCCCGGCAGTGCAGGGCGAGTTTCAGTGCTTAGCCTCCACAAGACCTATTTGCCACCACGCCATTTAGCTCCTTGTATATACACTTCCGTTTTGGAAAC
TGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCGAGAGGAGAGTCTAGTCATCCTCGGCAAGAGGTGAACATGGAGGAACAGATCTTTACGCGGATAACTC
AAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAGCCTTGGGTGCAACAACATTTGAAGGCACGACAGATCCC
GCTGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTCTTCCCGGCAGTGCAGGGCGAGTTTCAGTGCTTAGCCTCCACAAGACCTATTTGCCACCACGCCATTTAGCTCCTTGTATATACACTTCCGTTTTGGAAAC
TGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCGAGAGGAGAGTCTAGTCATCCTCGGCAAGAGGTGAACATGGAGGAACAGATCTTTACGCGGATAACTC
AAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAGCCTTGGGTGCAACAACATTTGAAGGCACGACAGATCCC
GCTGATCTTTGA
Protein sequenceShow/hide protein sequence
MSTLPGSAGRVSVLSLHKTYLPPRHLAPCIYTSVLETGTQEATGDRGREVSRGESSHPRQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDP
ADL