; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0015758 (gene) of Snake gourd v1 genome

Gene IDTan0015758
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNase H domain-containing protein
Genome locationLG11:10931389..10931643
RNA-Seq ExpressionTan0015758
SyntenyTan0015758
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038679.1 hypothetical protein E6C27_scaffold92G002210 [Cucumis melo var. makuwa]4.1e-0537.66Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQGHNPLL
        W+    G W+ N D  W+D     G  WVVRD  G  I+      + +WP++VLEA A   GL  V S + GH  +L
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQGHNPLL

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0534.25Show/hide
Query:  KLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQ----GHNPLLW
        KLN+   WS+   +GG+ WV+ D  G+ I      + R+W VK+LE KA+++GLK  + + +     H P+++
Subjt:  KLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQ----GHNPLLW

XP_021800463.1 uncharacterized protein LOC110744764 [Prunus avium]5.3e-0545.31Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLK
        W P REG  K+N D  W      G +G V+RD RGNLI G      R  P +V EA+A+++GLK
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLK

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.5e-0739.13Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSL
        W P     W LNAD  WSD  +RGG+GW++R   G++++     V+    VK+LEA A+++GL+ + +L
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.6e-0433.33Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV
        W P     WKLN D  W    N GG+GW++RD +G +I      +     +  LE  A+ +GL+ +
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV

TrEMBL top hitse value%identityAlignment
A0A5D3E6P6 RNase H domain-containing protein2.0e-0537.66Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQGHNPLL
        W+    G W+ N D  W+D     G  WVVRD  G  I+      + +WP++VLEA A   GL  V S + GH  +L
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQGHNPLL

A0A6J1CP26 uncharacterized protein LOC1110134122.2e-0431.82Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV
        W P     WKLN +  W    N GG+GW++RD +G +I      +     +  LE  A+ +GL+ +
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV

A0A6J1DNV9 uncharacterized protein LOC1110224037.3e-0839.13Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSL
        W P     W LNAD  WSD  +RGG+GW++R   G++++     V+    VK+LEA A+++GL+ + +L
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSL

A0A6J1DSV1 uncharacterized protein LOC1110236087.5e-0533.33Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV
        W P     WKLN D  W    N GG+GW++RD +G +I      +     +  LE  A+ +GL+ +
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQV

A0A6P5RF39 uncharacterized protein LOC1107447642.6e-0545.31Show/hide
Query:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLK
        W P REG  K+N D  W      G +G V+RD RGNLI G      R  P +V EA+A+++GLK
Subjt:  WVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAAGTTGGATGTTGGGTGCCCCTAAGGGAGGGGTGTTGGAAGCTGAATGCAGATGTTGTGTGGTCTGATCGCTGCAACAGAGGAGGATTAGGCTGGGTGGTTAG
AGACGGCAGAGGAAATCTGATCATTGGCAGAATGGGTCATGTTGATCGAAGGTGGCCTGTGAAAGTACTTGAAGCGAAAGCGGTGGTTGATGGCCTAAAACAGGTAGTTT
CTTTATGGCAGGGTCACAATCCCCTCTTGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAAGTTGGATGTTGGGTGCCCCTAAGGGAGGGGTGTTGGAAGCTGAATGCAGATGTTGTGTGGTCTGATCGCTGCAACAGAGGAGGATTAGGCTGGGTGGTTAG
AGACGGCAGAGGAAATCTGATCATTGGCAGAATGGGTCATGTTGATCGAAGGTGGCCTGTGAAAGTACTTGAAGCGAAAGCGGTGGTTGATGGCCTAAAACAGGTAGTTT
CTTTATGGCAGGGTCACAATCCCCTCTTGTGGTGA
Protein sequenceShow/hide protein sequence
MIKVGCWVPLREGCWKLNADVVWSDRCNRGGLGWVVRDGRGNLIIGRMGHVDRRWPVKVLEAKAVVDGLKQVVSLWQGHNPLLW