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Tan0015801 (gene) of Snake gourd v1 genome

Gene IDTan0015801
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG07:30378339..30378865
RNA-Seq ExpressionTan0015801
SyntenyTan0015801
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]3.5e-3369.16Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQERDFQEKAG-DEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCKNKSEKEALENQVQERLGDNKSFRKRSR
        MDDKSLPYNLRLRKDHK+S+ TE SK  K +RDFQEKA  D++Y  H++VDYRCEKCG SFD+E+SL SHHCKNK+E+EA+E +    LG+NKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQERDFQEKAG-DEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCKNKSEKEALENQVQERLGDNKSFRKRSR

Query:  KGIPTRA
        KG+P RA
Subjt:  KGIPTRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3172.07Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR
        MDDKS+PYNLRLRKDHKASA+TE SK QKQ ER+FQEK G+E     V+  Y C+KCG SFDL+ SLRSHHCK  NKSEKEA+EN+V+E LG +KS RKR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR

Query:  SRKGIPTRAPF
        +RKGIPTRAPF
Subjt:  SRKGIPTRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-3171.17Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR
        MD+KS+PYNLRLRKDHKASA+TE SK QKQ ER+FQEK G+E     V+  Y C+KCG SFDL+ SLRSHHCK  NKSEKEA+EN+V+E LG +KS RKR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR

Query:  SRKGIPTRAPF
        +RKGIPTRAPF
Subjt:  SRKGIPTRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]5.6e-3170.54Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR
        MD+KS+PYNLRLRKDHKASA+TE SK QKQ ER+FQEK G+E     V+  Y C+KCG SFDL+ SLRSHHCK  NKSE+EA EN+V+E LG +KS RKR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR

Query:  SRKGIPTRAPFF
        +RKGIPTRAPFF
Subjt:  SRKGIPTRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]8.7e-3272.32Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR
        MDDKS+PYNLRLRKDHKASA+TE SK QKQ ER+FQEK G+E     V+  Y C+KCG SFDL+ SLRSHHCK  NKSEKEA+EN+V E LG +KS RKR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR

Query:  SRKGIPTRAPFF
        +RKGIPTRAPFF
Subjt:  SRKGIPTRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein8.2e-3670Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQERDFQEKAG-DEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCKNKSEKEALENQVQERLGDNKSFRKRSR
        MDDKSLPYNLRLRKDHK+S+ TE SK  K +RDFQEKA  D++Y  H++VDYRCEKCG SFD+E+SL SHHCKNK+E+EA+E +    LG+NKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQERDFQEKAG-DEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCKNKSEKEALENQVQERLGDNKSFRKRSR

Query:  KGIPTRAPFF
        KG+P RAPFF
Subjt:  KGIPTRAPFF

A0A6J1D739 uncharacterized protein LOC1110179593.2e-2464.96Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKI-QKQERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHH--CKNKSEKEALENQVQERLGD-----NK
        MDDKSLPYNLRLR   KASA TEPSKI QK ERDFQEK GDE  G    ++ RCEKCG  F +E SL SHH  CKNK  +E +ENQV   + D      K
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKI-QKQERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHH--CKNKSEKEALENQVQERLGD-----NK

Query:  SFRKRSRKGIPTRAPFF
        SFRKRSRKGIPTRAP F
Subjt:  SFRKRSRKGIPTRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349502.7e-3170.54Show/hide
Query:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR
        MD+KS+PYNLRLRKDHKASA+TE SK QKQ ER+FQEK G+E     V+  Y C+KCG SFDL+ SLRSHHCK  NKSE+EA EN+V+E LG +KS RKR
Subjt:  MDDKSLPYNLRLRKDHKASASTEPSKIQKQ-ERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCK--NKSEKEALENQVQERLGDNKSFRKR

Query:  SRKGIPTRAPFF
        +RKGIPTRAPFF
Subjt:  SRKGIPTRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACAAGTCACTTCCTTATAATCTTCGACTTCGGAAAGATCACAAGGCTTCTGCTTCAACTGAACCTTCCAAAATTCAAAAGCAAGAAAGGGATTTCCAGGAAAA
GGCAGGTGATGAAGTATATGGAGGCCATGTAGTTGTTGATTACCGATGTGAAAAATGTGGATCCTCTTTTGATCTTGAAACTTCTCTTCGCTCACACCATTGCAAAAATA
AGAGTGAGAAAGAGGCTCTGGAAAATCAAGTGCAGGAAAGGTTGGGGGACAATAAATCTTTTAGAAAAAGAAGCAGGAAGGGAATACCAACACGGGCTCCTTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGACAAGTCACTTCCTTATAATCTTCGACTTCGGAAAGATCACAAGGCTTCTGCTTCAACTGAACCTTCCAAAATTCAAAAGCAAGAAAGGGATTTCCAGGAAAA
GGCAGGTGATGAAGTATATGGAGGCCATGTAGTTGTTGATTACCGATGTGAAAAATGTGGATCCTCTTTTGATCTTGAAACTTCTCTTCGCTCACACCATTGCAAAAATA
AGAGTGAGAAAGAGGCTCTGGAAAATCAAGTGCAGGAAAGGTTGGGGGACAATAAATCTTTTAGAAAAAGAAGCAGGAAGGGAATACCAACACGGGCTCCTTTCTTTTAG
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKASASTEPSKIQKQERDFQEKAGDEVYGGHVVVDYRCEKCGSSFDLETSLRSHHCKNKSEKEALENQVQERLGDNKSFRKRSRKGIPTRAPFF