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Tan0015818 (gene) of Snake gourd v1 genome

Gene IDTan0015818
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationLG08:15841636..15852290
RNA-Seq ExpressionTan0015818
SyntenyTan0015818
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035606.1 Transposon, En/Spm-like protein [Cucumis melo var. makuwa]3.7e-2253.97Show/hide
Query:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV
        S S  SSR+FGSGNR R  SN     +SN+++   QE  +++S  Q   TK +GR ATRGV LEKYV A+G I I+ID EDRK +FK+SSKLN  I + V
Subjt:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV

Query:  RGIVPLQWEQWSDVTQDVKNEIIERL
        R +VPL+ E WSDV+++VK EI++RL
Subjt:  RGIVPLQWEQWSDVTQDVKNEIIERL

KAA0046978.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]5.0e-1956Show/hide
Query:  DSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERL
        +SN+++   QE  +++S+ Q   TK +GRGATRGV LEKYV A+G I I+ID EDRK + K+SSKLN  IG+ VR IVPL+ E WSDV+++VK EI++RL
Subjt:  DSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERL

TYK04806.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]1.1e-2355.37Show/hide
Query:  SSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVP
        SSR+FG GNR R  SN     +SN+++   QE  +++S+ Q   TK +GRGATRGV LEKYV A+G I I+ID EDRK + K+SSKLN  IG+ VR IVP
Subjt:  SSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVP

Query:  LQWEQWSDVTQDVKNEIIERL
        L+ E WSDV+++VK EI++RL
Subjt:  LQWEQWSDVTQDVKNEIIERL

XP_022156301.1 uncharacterized protein LOC111023227 [Momordica charantia]8.2e-1443.36Show/hide
Query:  LSTSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQL
        ++ SR SS + G GNR    SN     D  E+T  G+   T  S+     TK++GR  T G+ ++K+V  HG I I I+ ED K V  +S KL   IG  
Subjt:  LSTSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQL

Query:  VRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY
        VR IV L  E WSDV QD KN II RL N FI ++N+ +V  Y
Subjt:  VRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]7.7e-1240.22Show/hide
Query:  KKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY
        K+R RG +R + L+++V+ HGRI I+ID E  K V  N++K +  IG + R  +PL+ + WSDV+++V++ ++++LL+YF FD+ +  V+ Y
Subjt:  KKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY

TrEMBL top hitse value%identityAlignment
A0A5A7T089 Transposon, En/Spm-like protein1.8e-2253.97Show/hide
Query:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV
        S S  SSR+FGSGNR R  SN     +SN+++   QE  +++S  Q   TK +GR ATRGV LEKYV A+G I I+ID EDRK +FK+SSKLN  I + V
Subjt:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV

Query:  RGIVPLQWEQWSDVTQDVKNEIIERL
        R +VPL+ E WSDV+++VK EI++RL
Subjt:  RGIVPLQWEQWSDVTQDVKNEIIERL

A0A5A7TVR8 Formin-like protein 4 isoform X22.4e-1956Show/hide
Query:  DSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERL
        +SN+++   QE  +++S+ Q   TK +GRGATRGV LEKYV A+G I I+ID EDRK + K+SSKLN  IG+ VR IVPL+ E WSDV+++VK EI++RL
Subjt:  DSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQWEQWSDVTQDVKNEIIERL

A0A5D3BIG6 DUF4218 domain-containing protein4.9e-1238.73Show/hide
Query:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV
        S+   SSR+FGS NR R  SN     +SN+++   QE  +++S+ Q   TK +G+GATR V LEKYV  +G   I+ID EDRK ++              
Subjt:  STSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLV

Query:  RGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY
                     V+++VK EI++ L NYFI D+NE +V+DY
Subjt:  RGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY

A0A5D3C2Z5 Formin-like protein 4 isoform X25.6e-2455.37Show/hide
Query:  SSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVP
        SSR+FG GNR R  SN     +SN+++   QE  +++S+ Q   TK +GRGATRGV LEKYV A+G I I+ID EDRK + K+SSKLN  IG+ VR IVP
Subjt:  SSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVP

Query:  LQWEQWSDVTQDVKNEIIERL
        L+ E WSDV+++VK EI++RL
Subjt:  LQWEQWSDVTQDVKNEIIERL

A0A6J1DUJ0 uncharacterized protein LOC1110232274.0e-1443.36Show/hide
Query:  LSTSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQL
        ++ SR SS + G GNR    SN     D  E+T  G+   T  S+     TK++GR  T G+ ++K+V  HG I I I+ ED K V  +S KL   IG  
Subjt:  LSTSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQL

Query:  VRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY
        VR IV L  E WSDV QD KN II RL N FI ++N+ +V  Y
Subjt:  VRGIVPLQWEQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCCACGTCTAGGAGGTCTTCAAGAAGTTTCGGATCAGGAAATCGTGGTCGACCCATATCAAACAGTCAACCAACGGAGGATTCTAATGAAGATACTAATAGAGG
GCAAGAAGATGATACCATGAATTCAAATGCTCAGGGTTTTAGGACTAAAAAAAGAGGTCGAGGAGCAACAAGAGGGGTTGCACTTGAGAAGTATGTCCATGCTCATGGTC
GGATTCATATTAAAATTGATCTGGAAGATAGGAAACATGTTTTCAAGAACTCATCCAAATTGAACTTTACTATCGGGCAGCTGGTACGTGGAATCGTACCTCTTCAATGG
GAACAATGGTCAGATGTCACTCAAGATGTAAAAAACGAGATAATAGAAAGGCTTTTGAATTACTTCATTTTCGACATCAATGAACTCGTAGTACGAGACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCCACGTCTAGGAGGTCTTCAAGAAGTTTCGGATCAGGAAATCGTGGTCGACCCATATCAAACAGTCAACCAACGGAGGATTCTAATGAAGATACTAATAGAGG
GCAAGAAGATGATACCATGAATTCAAATGCTCAGGGTTTTAGGACTAAAAAAAGAGGTCGAGGAGCAACAAGAGGGGTTGCACTTGAGAAGTATGTCCATGCTCATGGTC
GGATTCATATTAAAATTGATCTGGAAGATAGGAAACATGTTTTCAAGAACTCATCCAAATTGAACTTTACTATCGGGCAGCTGGTACGTGGAATCGTACCTCTTCAATGG
GAACAATGGTCAGATGTCACTCAAGATGTAAAAAACGAGATAATAGAAAGGCTTTTGAATTACTTCATTTTCGACATCAATGAACTCGTAGTACGAGACTACTAG
Protein sequenceShow/hide protein sequence
MLSTSRRSSRSFGSGNRGRPISNSQPTEDSNEDTNRGQEDDTMNSNAQGFRTKKRGRGATRGVALEKYVHAHGRIHIKIDLEDRKHVFKNSSKLNFTIGQLVRGIVPLQW
EQWSDVTQDVKNEIIERLLNYFIFDINELVVRDY