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Tan0015834 (gene) of Snake gourd v1 genome

Gene IDTan0015834
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG01:49881515..49881739
RNA-Seq ExpressionTan0015834
SyntenyTan0015834
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025769.1 hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa]2.1e-0555.56Show/hide
Query:  ETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        E GT +AT    RE + G+++H   + NMEE+IF +I QRLA+ V  AQAD EKKYGIER+KA
Subjt:  ETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.1e-0548Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M RG  R     +T         G   S+ E+S P  E NMEEQ+  R+ QRL   + SAQ+DPEKKYGIERLKA
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

TYK11968.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.0e-0550.67Show/hide
Query:  MARGGKRGRQVETGTQEATGDRGR-EVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M+RG  R   V   +  A G   R E S+ E+SHP  E NMEE    R+ QRLA  + S QADPEKK GIE+LKA
Subjt:  MARGGKRGRQVETGTQEATGDRGR-EVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.6e-1175.51Show/hide
Query:  VSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        +SEGE+SHPQ EVN+EEQ+FTRI QRLA S+GS ++DPEKKY IERLKA
Subjt:  VSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]1.0e-0477.14Show/hide
Query:  MEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        ME+++F RITQRLA SVGS Q DPEKK+GIERLKA
Subjt:  MEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

TrEMBL top hitse value%identityAlignment
A0A5A7SKG0 Uncharacterized protein1.0e-0555.56Show/hide
Query:  ETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        E GT +AT    RE + G+++H   + NMEE+IF +I QRLA+ V  AQAD EKKYGIER+KA
Subjt:  ETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

A0A5A7T1M0 Reverse transcriptase1.5e-0445.33Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M RG  R     E          G   S+ E+S P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKA
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

A0A5D3BB91 Reverse transcriptase1.5e-0445.33Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M RG  R     E          G   S+ E+S P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKYG ERLKA
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

A0A5D3CLE5 DNA/RNA polymerases superfamily protein3.9e-0550.67Show/hide
Query:  MARGGKRGRQVETGTQEATGDRGR-EVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M+RG  R   V   +  A G   R E S+ E+SHP  E NMEE    R+ QRLA  + S QADPEKK GIE+LKA
Subjt:  MARGGKRGRQVETGTQEATGDRGR-EVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

A0A5D3DES5 DNA/RNA polymerases superfamily protein3.0e-0548Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA
        M RG  R     +T         G   S+ E+S P  E NMEEQ+  R+ QRL   + SAQ+DPEKKYGIERLKA
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCAGAGGGAGAGGCTAGTCATCCTCAACAAGA
GGTGAACATGGAGGAACAGATCTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTAAAAG
CCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCAGAGGGAGAGGCTAGTCATCCTCAACAAGA
GGTGAACATGGAGGAACAGATCTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTAAAAG
CCTAA
Protein sequenceShow/hide protein sequence
MARGGKRGRQVETGTQEATGDRGREVSEGEASHPQQEVNMEEQIFTRITQRLAESVGSAQADPEKKYGIERLKA